Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 PLA2G6-201ENST00000332509 3271 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 ATP8B3-203ENST00000526092 2759 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 MATN2-201ENST00000254898 4106 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC098679.3-201ENST00000512016 3115 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 KLHL30-AS1-201ENST00000623136 3106 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 THUMPD3-201ENST00000345094 3961 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 Y_RNA.57-201ENST00000362806 113 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SNORD116-10-201ENST00000363791 102 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SNORD115-32-201ENST00000364079 82 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-827P-201ENST00000365553 106 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-1286P-201ENST00000383871 107 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-1080P-201ENST00000383982 107 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 MIR548D2-201ENST00000384955 97 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 MIR32-201ENST00000384965 70 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 MIR153-2-201ENST00000385225 87 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-816P-201ENST00000390914 107 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-1268P-201ENST00000391214 107 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-1239P-201ENST00000391310 107 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 TUBB8P2-201ENST00000402141 495 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 HLFP1-201ENST00000402375 499 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SNORA77.1-201ENST00000408156 125 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6-1190P-201ENST00000410811 104 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC244636.1-201ENST00000421152 228 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 ACTG1P24-201ENST00000423783 877 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC092066.1-201ENST00000425131 317 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SNAI1P1-201ENST00000428587 777 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 H3F3BP1-201ENST00000440551 403 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SLC18A1-205ENST00000440926 2956 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC008267.4-201ENST00000442005 521 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC025062.1-201ENST00000465163 644 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RN7SL465P-201ENST00000468411 301 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 NDUFS5P2-201ENST00000484004 306 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RN7SL183P-201ENST00000488870 298 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC009120.1-201ENST00000493458 473 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC074344.2-201ENST00000502846 565 ntTSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL031073.1-201ENST00000503029 1139 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC093767.1-201ENST00000504523 156 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU6ATAC14P-201ENST00000516218 91 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 RNU2-44P-201ENST00000516795 194 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 IGLV3-29-201ENST00000520084 244 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AP004245.1-201ENST00000530434 259 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 PGA3-204ENST00000538258 867 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 PGA4-206ENST00000544899 867 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL929601.1-202ENST00000551067 418 ntTSL 3 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 HMGN2P47-201ENST00000559378 272 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC010287.1-201ENST00000566916 357 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC027688.1-201ENST00000568471 584 ntTSL 4 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC036176.2-201ENST00000589763 1153 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL365205.3-201ENST00000593368 169 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC007228.1-201ENST00000600036 142 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC106800.4-201ENST00000614905 153 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC026468.1-201ENST00000614981 107 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC007998.5-201ENST00000622938 237 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SLC35A4-204ENST00000623481 683 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CDRT1-208ENST00000630868 794 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AC105429.1-201ENST00000612833 4001 ntBASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 BMPR1B-208ENST00000515059 5567 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 EPB41L4A-211ENST00000621003 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CAMKK1-203ENST00000381769 3508 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 BCAS3-203ENST00000408905 3514 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 TNIK-206ENST00000460047 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 KANK4-203ENST00000371150 3023 ntTSL 2 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRTAP4-9Q9BYQ8 MARK2P15-201ENST00000432204 2186 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms