Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 SUMO2P3-201ENST00000438311 288 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 MED6P1-201ENST00000439659 713 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC093166.2-201ENST00000455969 1017 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC093166.4-201ENST00000457867 318 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 RPS4XP15-201ENST00000489210 795 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC109462.1-201ENST00000491087 368 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC021269.1-201ENST00000526860 705 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 MTND2P26-201ENST00000528255 1029 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC137695.2-201ENST00000603123 754 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AL359757.1-201ENST00000623176 255 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC132068.1-201ENST00000623805 459 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC133552.1-201ENST00000569988 4007 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 AC140479.2-201ENST00000421567 3130 ntBASIC1.9□□□□□ -2.11
HMCN1Q96RW7 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMCN1Q96RW7 U3.2-201ENST00000362981 210 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RN7SKP224-201ENST00000364140 325 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL049693.1-201ENST00000402760 611 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PRRC2CP1-201ENST00000404428 159 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 RPS15AP30-201ENST00000420976 390 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC019178.2-201ENST00000423595 505 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 DNAJC19P7-201ENST00000428811 344 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SEPT14P12-201ENST00000442280 560 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ARL5AP2-201ENST00000444698 533 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AL627224.1-201ENST00000448334 444 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 FRG2DP-202ENST00000566967 323 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MIR4679-2-201ENST00000578358 77 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MIR4505-201ENST00000582238 73 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC006566.1-201ENST00000608943 513 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 MIR6716-201ENST00000613413 80 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC020978.9-201ENST00000624380 1141 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 AC009161.2-201ENST00000624626 138 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SALL1-202ENST00000440970 5253 ntTSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 FAR1-201ENST00000354817 5264 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SMG1P5-202ENST00000529428 4219 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SMG1P2-201ENST00000566127 4221 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 NEK2P4-201ENST00000425793 1329 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 EEF1A1P30-201ENST00000429708 1315 ntBASIC1.89□□□□□ -2.11
HMCN1Q96RW7 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMCN1Q96RW7 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms