Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 DHFRP1-201ENST00000579682 559 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC098935.2-201ENST00000604222 466 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC100767.2-201ENST00000604840 693 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 OR7A19P-201ENST00000608051 733 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC108673.3-201ENST00000609183 335 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL122125.1-201ENST00000616999 600 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 SNX18P12-201ENST00000624821 759 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC103703.1-201ENST00000634783 663 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC008432.1-201ENST00000615912 1320 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC093591.2-201ENST00000565254 3843 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC016583.1-201ENST00000624221 2431 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC107021.2-201ENST00000567714 2095 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 TMSB4XP2-201ENST00000335179 210 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 RNA5SP110-201ENST00000362638 115 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 OR13C3-201ENST00000374781 1108 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 RNU6-207P-201ENST00000384137 107 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AF228730.1-201ENST00000397972 663 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 RPL26P37-201ENST00000411983 438 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 Z68694.1-201ENST00000413929 841 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 DSTNP5-201ENST00000427921 523 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 RPL23AP19-201ENST00000436229 369 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 ELOCP13-201ENST00000443934 329 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 MED28P3-201ENST00000444288 531 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC023245.1-201ENST00000468501 517 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC099521.1-201ENST00000482557 334 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 RPS3AP15-201ENST00000483874 781 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC104109.1-201ENST00000498563 436 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC105233.1-201ENST00000498840 781 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC008427.1-201ENST00000503102 655 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC093720.1-201ENST00000505681 714 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 RNA5SP340-201ENST00000517132 107 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC010376.1-201ENST00000522101 334 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 OR8G5-201ENST00000524943 1041 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 MTND3P12-201ENST00000559068 328 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC021483.2-201ENST00000567415 758 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 ZNF322P1-201ENST00000568013 1209 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC092121.1-201ENST00000569452 202 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 COX6CP7-201ENST00000597056 208 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 AL022067.1-201ENST00000602426 454 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 MTCO2P22-201ENST00000603246 681 ntBASIC5.67□□□□□ -1.5
VPS50Q96JG6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS50Q96JG6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS50Q96JG6 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS50Q96JG6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VPS50Q96JG6 TTC39DP-201ENST00000416781 1688 ntBASIC5.66□□□□□ -1.5
VPS50Q96JG6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms