Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL136455.1-201ENST00000441083 1240 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AL031584.1-201ENST00000447169 754 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC104634.1-201ENST00000452720 462 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC093166.2-201ENST00000455969 1017 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 GYG1P1-201ENST00000460864 698 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC091180.1-201ENST00000462104 372 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AL591473.1-201ENST00000464297 313 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 SIAH1P1-201ENST00000479411 923 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 BX510359.5-201ENST00000515651 304 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC126177.5-201ENST00000549599 178 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AL390334.1-201ENST00000556395 450 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AGGF1P9-201ENST00000561884 913 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 RPL10P14-201ENST00000565265 298 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC011445.2-201ENST00000599274 173 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC016252.1-201ENST00000609721 474 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AL359513.1-201ENST00000614364 557 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 AC015871.5-202ENST00000623252 701 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 SCARNA15-201ENST00000607520 4325 ntBASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RTN4IP1Q8WWV3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 AC107068.1-201ENST00000563286 4218 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 SAMMSON-213ENST00000641336 1521 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 U3.25-201ENST00000391209 220 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 AC005522.1-201ENST00000395416 346 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 SNORA11.3-201ENST00000408471 128 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 AL139148.1-201ENST00000427122 680 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 RN7SL101P-201ENST00000496350 279 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 AC138938.1-201ENST00000515431 782 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 RN7SKP46-201ENST00000515942 234 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 RNU6-941P-201ENST00000516346 108 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 AC007066.2-202ENST00000566531 914 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 BNIP3P35-201ENST00000604530 490 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 TAS2R6P-201ENST00000605022 826 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 SNORA11.6-201ENST00000619030 128 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 MIR6837-201ENST00000620884 64 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 MIR4302-201ENST00000638058 60 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 OR55B1P-203ENST00000641518 2602 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 MAPK10-320ENST00000641462 6696 ntBASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.28□□□□□ -1.72
RTN4IP1Q8WWV3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 RN7SKP160-201ENST00000363804 340 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 RNU1-146P-201ENST00000364015 165 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 UBBP2-201ENST00000376781 231 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 SNORA67-201ENST00000384423 137 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 COX6CP13-201ENST00000428703 226 ntBASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.27□□□□□ -1.73
RTN4IP1Q8WWV3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms