Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 PPIAP24-201ENST00000328558 471 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 STAG3L4-201ENST00000352103 530 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNA5SP140-201ENST00000364524 92 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNU4-91P-201ENST00000364778 135 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNY3P10-201ENST00000384764 102 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RANP6-201ENST00000413691 644 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 CYCSP52-201ENST00000422857 310 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC003989.1-201ENST00000434569 565 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 MTCO2P25-201ENST00000447065 681 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 PSAT1P4-201ENST00000466500 526 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RPS3AP49-201ENST00000472161 790 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RPL23AP37-201ENST00000479658 549 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC004924.1-201ENST00000480160 781 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RPL19P11-201ENST00000495944 589 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 MRPS5P3-201ENST00000515577 166 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNU6-1308P-201ENST00000516817 103 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 NPM1P6-201ENST00000521088 871 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC084337.1-201ENST00000524809 686 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 KCTD9P4-201ENST00000526766 1166 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RN7SL32P-201ENST00000580514 281 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC091193.1-201ENST00000604640 448 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 LSM1P2-201ENST00000604911 322 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC068276.1-201ENST00000605793 379 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AP005137.2-201ENST00000609238 400 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 MIR7844-201ENST00000616161 122 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.11□□□□□ -1.43
NUP43Q8NFH3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP43Q8NFH3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CASC19-243ENST00000641588 1546 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 AL022323.4-201ENST00000623980 13120 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP43Q8NFH3 RNU6-543P-201ENST00000362576 108 ntBASIC6.1□□□□□ -1.43
NUP43Q8NFH3 RNA5SP350-201ENST00000363298 111 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms