Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 RN7SKP113-201ENST00000363891 295 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 SNORA79B-201ENST00000410557 148 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AP000534.2-201ENST00000412729 568 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC234781.4-201ENST00000419384 244 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 MARK2P12-201ENST00000420129 585 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 COX6CP13-201ENST00000428703 226 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC245028.2-201ENST00000458673 253 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC021660.1-201ENST00000465006 554 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 COPS8P2-201ENST00000473228 627 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC004825.1-201ENST00000555068 586 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC084759.1-201ENST00000561168 290 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC018695.5-201ENST00000605872 315 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC126915.2-201ENST00000610957 190 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC008833.1-201ENST00000611633 691 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 AC022467.1-201ENST00000614738 749 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 STX3-208ENST00000641815 3236 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 ADAM5-202ENST00000399789 1942 ntBASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC65Q8IXS2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 MTHFD2P5-201ENST00000320415 844 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 RN7SKP126-201ENST00000411143 300 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AC245047.2-201ENST00000441060 530 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AC004980.3-201ENST00000447046 365 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 RN7SL443P-201ENST00000464331 290 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 COX6B1P2-201ENST00000489624 230 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 OR4A46P-201ENST00000527255 933 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AL358913.1-201ENST00000554342 121 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 RPSAP73-201ENST00000614820 330 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC65Q8IXS2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 SNORA2.3-201ENST00000383920 135 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 RN7SKP247-201ENST00000411094 308 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 OR13Z1P-201ENST00000416141 834 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 RN7SL172P-201ENST00000460535 303 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 RN7SL30P-201ENST00000488416 306 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC005412.2-201ENST00000492004 341 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AP005432.2-201ENST00000608162 586 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC099494.2-201ENST00000623371 978 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AC004808.2-201ENST00000627965 773 ntBASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC65Q8IXS2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms