Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC02210-201ENST00000444561 288 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AP002345.1-201ENST00000456493 928 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 RPL7AP52-201ENST00000458096 790 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 PSMC1P13-201ENST00000458195 985 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 PSAT1P4-201ENST00000466500 526 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 METTL15P1-201ENST00000481421 1045 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 RPL37AP8-201ENST00000494116 276 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 FABP5P6-201ENST00000510588 409 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC108120.2-201ENST00000512973 294 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 IGLV3-24-201ENST00000517477 197 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 IGKV3D-34-201ENST00000522638 302 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 PMS2P3-207ENST00000529061 717 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 RBM22P12-201ENST00000567098 1255 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC040174.2-201ENST00000602701 465 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AL133247.2-201ENST00000603236 482 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 RNA5SP440-201ENST00000612665 119 ntBASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP54Q7Z3B4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC138907.8-201ENST00000623981 2256 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 GAPDHP24-201ENST00000328713 983 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 MIR323A-201ENST00000362199 86 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 MIR551A-201ENST00000385042 96 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 MIR320B1-201ENST00000390209 79 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 RNA5SP498-201ENST00000411342 120 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AL133173.1-201ENST00000423458 397 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 ELOCP10-201ENST00000440624 327 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 PTMAP3-201ENST00000447474 330 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AL596266.1-201ENST00000448132 400 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 NPM1P28-201ENST00000492269 840 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 HMGB1P47-201ENST00000511281 589 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC108471.1-201ENST00000513977 287 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC127381.1-201ENST00000555979 939 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 ELOCP34-201ENST00000604436 327 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC135803.1-201ENST00000608748 565 ntBASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUP54Q7Z3B4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms