Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NHLRC1Q6VVB1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NHLRC1Q6VVB1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
NHLRC1Q6VVB1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NHLRC1Q6VVB1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.92□□□□□ -1.62
NHLRC1Q6VVB1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NHLRC1Q6VVB1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC073136.1-201ENST00000449426 2884 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC100757.1-201ENST00000616872 1835 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 STX3-208ENST00000641815 3236 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 RN7SKP6-201ENST00000364795 319 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 RNU6-532P-201ENST00000384318 107 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AL031985.1-201ENST00000392713 418 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC009302.1-201ENST00000417147 390 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC073465.2-201ENST00000440938 498 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC099063.2-201ENST00000446360 662 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 HMGN1P36-201ENST00000446623 298 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 PSMC1P13-201ENST00000458195 985 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 LINC00557-201ENST00000563184 1279 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 PPATP2-201ENST00000605635 508 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC008115.3-201ENST00000614874 549 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC073869.8-201ENST00000641806 335 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 AC079097.1-201ENST00000512187 1399 ntBASIC4.91□□□□□ -1.62
NHLRC1Q6VVB1 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 AC079298.1-201ENST00000625026 1619 ntBASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NHLRC1Q6VVB1 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 SNORD51.1-201ENST00000365405 77 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 SNORA16A-201ENST00000384342 137 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 MIR320B1-201ENST00000390209 79 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC105402.1-201ENST00000413336 545 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 OR6E1P-201ENST00000414424 923 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 SDHDP6-201ENST00000414693 480 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 RPS29P14-201ENST00000431518 171 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 MTND4LP7-201ENST00000431728 294 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AL359265.1-201ENST00000440296 795 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 EEF1B2P6-201ENST00000445713 673 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC243772.1-201ENST00000451620 410 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC092691.2-201ENST00000461787 803 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 RN7SL809P-201ENST00000482040 297 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 CDH12P2-201ENST00000504393 298 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 SCARNA20.4-201ENST00000516969 131 ntBASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.9□□□□□ -1.63
NHLRC1Q6VVB1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms