Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RNA5SP346-201ENST00000363541 121 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 snoZ40.1-201ENST00000364540 72 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL445238.1-204ENST00000400311 463 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RN7SKP86-201ENST00000410454 332 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RN7SKP59-201ENST00000410520 314 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RN7SKP121-201ENST00000410842 305 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RPS17P17-201ENST00000419392 409 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 GAPDHP49-201ENST00000421421 961 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 NPM1P22-201ENST00000427761 952 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 MTCO3P21-201ENST00000430791 643 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RPS24P8-201ENST00000431490 402 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 TIMM8BP2-201ENST00000445940 251 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RHEBP2-201ENST00000450289 600 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 HIGD1AP16-201ENST00000450986 258 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 MRPL42P4-201ENST00000453267 443 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 BX248409.1-201ENST00000455497 255 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RPL23AP12-201ENST00000467573 473 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RN7SL165P-201ENST00000477476 291 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC092349.1-201ENST00000504903 310 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC138938.1-201ENST00000515431 782 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RNU6-416P-201ENST00000516265 103 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RN7SKP248-201ENST00000516278 305 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 RNU5A-4P-201ENST00000516588 111 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC010306.1-201ENST00000523223 1117 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC002519.2-203ENST00000567043 837 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AGGF1P6-201ENST00000569213 976 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL078601.3-201ENST00000573303 535 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 MIR3154-201ENST00000577829 84 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC022662.1-201ENST00000580252 331 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC068790.7-201ENST00000602347 528 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 FAM72A-208ENST00000607379 1139 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC092608.3-201ENST00000625017 386 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 SAMMSON-209ENST00000641222 1100 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC005225.5-201ENST00000623547 2225 ntBASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144NLQ6NUI1 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 AL355834.1-201ENST00000556602 3965 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 RN7SKP237-201ENST00000364663 301 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 OR1L1-202ENST00000373686 1083 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 PEX12P1-201ENST00000400284 1048 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 RNA5SP198-201ENST00000410376 127 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 RNU6-575P-201ENST00000411326 105 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 AL596448.1-201ENST00000415024 392 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 AC245884.2-201ENST00000426257 404 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 KCTD9P1-201ENST00000430462 1167 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 DEFA9P-201ENST00000433042 285 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 ARMC4P1-201ENST00000438905 707 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 EXTL2P1-201ENST00000446218 416 ntBASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144NLQ6NUI1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms