Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AL591767.3-201ENST00000554632 525 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC007151.1-201ENST00000572774 483 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 RPS3AP23-202ENST00000574601 686 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC008507.3-201ENST00000585753 472 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AL009028.1-201ENST00000604895 802 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 RNU6ATAC35P-201ENST00000609276 444 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC040896.1-201ENST00000613819 479 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 MIR6085-201ENST00000618314 110 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 AC138649.3-201ENST00000622154 254 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 LINC01739-205ENST00000641890 573 ntBASIC8.36□□□□□ -1.07
RC3H1Q5TC82 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC8.36□□□□□ -1.07
RC3H1Q5TC82 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 KARSP1-201ENST00000451871 1752 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AL079343.1-201ENST00000572358 1771 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 PSG10P-201ENST00000501199 1500 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 RPL7AP14-201ENST00000424041 802 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 EMC3-AS1-205ENST00000438698 534 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 MTCYBP6-201ENST00000441810 138 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 RPL23AP76-201ENST00000441860 458 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC008837.2-201ENST00000513076 418 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 RN7SKP141-201ENST00000516167 338 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 FXNP1-201ENST00000555153 337 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 BNIP3P26-201ENST00000600827 554 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AL020991.1-201ENST00000612314 373 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AL158209.2-201ENST00000619266 216 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC018692.2-201ENST00000624130 348 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 PHACTR2P1-201ENST00000605639 1414 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC000367.1-201ENST00000452711 1766 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RC3H1Q5TC82 SAMM50P1-201ENST00000455403 1399 ntBASIC8.35□□□□□ -1.07
RC3H1Q5TC82 AC009831.5-201ENST00000624000 3189 ntBASIC8.34□□□□□ -1.07
RC3H1Q5TC82 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RC3H1Q5TC82 RPL12P13-201ENST00000310055 497 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms