Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MTATP6P27-201ENST00000416987 621 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.89□□□□□ -1.31
SOX4Q06945 MRPS36P1-201ENST00000421291 307 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 AC112492.2-201ENST00000432774 1030 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 TCEA1P3-201ENST00000443005 880 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX4Q06945 USP9YP34-201ENST00000453983 808 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX4Q06945 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 NPM1P27-201ENST00000502784 830 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 SNORA58-201ENST00000505219 137 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX4Q06945 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX4Q06945 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.89□□□□□ -1.31
SOX4Q06945 SNORA31.13-201ENST00000516624 135 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC036111.2-201ENST00000533247 901 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX4Q06945 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 AC026826.3-201ENST00000561747 158 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC009063.1-201ENST00000563342 702 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX4Q06945 AC127024.5-201ENST00000580085 462 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 MIR4502-201ENST00000580432 81 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SOX4Q06945 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX4Q06945 AC124916.2-201ENST00000604416 224 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 MIR6811-201ENST00000620409 58 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 OR5H6-203ENST00000642105 978 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 NCOA4P3-201ENST00000513203 1877 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.89□□□□□ -1.31
SOX4Q06945 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 AL136984.1-201ENST00000607611 1893 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 IFIT1P1-201ENST00000400497 1449 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 MTND4P16-201ENST00000466108 1367 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AC010624.4-201ENST00000597606 1351 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SOX4Q06945 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SOX4Q06945 Y_RNA.554-201ENST00000384672 102 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.88□□□□□ -1.31
SOX4Q06945 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 RPL34P27-201ENST00000428810 349 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX4Q06945 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 PMS2P9-201ENST00000441237 515 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 RAB11AP1-201ENST00000442978 646 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX4Q06945 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 SSXP1-201ENST00000453640 473 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 RNA5SP269-201ENST00000459032 137 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 RPL12P31-201ENST00000478433 450 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 TMED11P-201ENST00000479478 690 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.88□□□□□ -1.31
SOX4Q06945 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.88□□□□□ -1.31
SOX4Q06945 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.88□□□□□ -1.31
SOX4Q06945 AC013701.1-201ENST00000522657 465 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.88□□□□□ -1.31
SOX4Q06945 AC006512.2-201ENST00000543250 486 ntBASIC6.88□□□□□ -1.31
SOX4Q06945 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SOX4Q06945 AL845552.1-201ENST00000556820 323 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms