Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 uc_338.9-201ENST00000617424 182 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AP000550.3-201ENST00000637734 379 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 MFSD8-245ENST00000641743 948 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 SAGE3P-201ENST00000619800 1635 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC013488.1-201ENST00000526618 1838 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AC025809.2-201ENST00000625085 1802 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC011455.2-201ENST00000599320 3336 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 FAM133CP-201ENST00000332869 704 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 RNU6-317P-201ENST00000384031 107 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 RN7SKP281-201ENST00000410472 352 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 MFSD13B-201ENST00000420133 1290 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.55□□□□□ -1.52
NKX6-1P78426 DEFA9P-201ENST00000433042 285 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 PNKDP1-201ENST00000435914 430 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AL008629.1-201ENST00000438615 184 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AL645936.1-201ENST00000441979 518 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 RPS26P30-201ENST00000443431 335 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 HMGB1P48-201ENST00000446155 598 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 BX248409.1-201ENST00000455497 255 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 RPL35AP19-201ENST00000469425 329 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.55□□□□□ -1.52
NKX6-1P78426 RN7SL174P-201ENST00000475578 289 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC084024.2-201ENST00000503480 791 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 RNA5SP418-201ENST00000515951 117 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 TRIM77BP-201ENST00000524985 1119 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 MIR4675-201ENST00000577898 77 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC090312.2-201ENST00000582687 378 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
NKX6-1P78426 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC073046.2-201ENST00000604756 527 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AC093783.1-201ENST00000612976 329 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AC023509.5-201ENST00000617434 807 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AL158163.2-201ENST00000619110 700 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 MRPL57P1-201ENST00000621486 265 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 AC006840.1-201ENST00000623069 542 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX6-1P78426 TNPO1P2-201ENST00000426249 2665 ntBASIC5.55□□□□□ -1.52
NKX6-1P78426 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX6-1P78426 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX6-1P78426 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms