Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HMGB3P7-201ENST00000400214 611 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 OR51A6P-201ENST00000418680 1004 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 RPL34P3-201ENST00000421454 338 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 DSTNP5-201ENST00000427921 523 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN12P56749 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN12P56749 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN12P56749 AL591363.1-201ENST00000450091 483 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 RANP1-206ENST00000455094 651 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN12P56749 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN12P56749 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN12P56749 HMGB1P19-201ENST00000517578 577 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.39□□□□□ -1.71
CLDN12P56749 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN12P56749 RPL23AP53-201ENST00000521854 457 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 IGKV2-4-201ENST00000523070 340 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN12P56749 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLDN12P56749 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN12P56749 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN12P56749 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.39□□□□□ -1.71
CLDN12P56749 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.39□□□□□ -1.71
CLDN12P56749 CYCSP40-201ENST00000575927 294 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 MIR8069-1-201ENST00000616627 86 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 MIR8069-2-201ENST00000621412 86 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLDN12P56749 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CLDN12P56749 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN12P56749 AC068446.1-201ENST00000556425 1549 ntBASIC4.39□□□□□ -1.71
CLDN12P56749 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN12P56749 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN12P56749 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN12P56749 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN12P56749 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN12P56749 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN12P56749 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN12P56749 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 RNA5SP335-201ENST00000363817 110 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 RNA5SP234-201ENST00000363916 119 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDN12P56749 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDN12P56749 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 AL390119.1-201ENST00000440329 312 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 TXNP5-201ENST00000441043 315 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 AC004980.3-201ENST00000447046 365 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 AL031584.1-201ENST00000447169 754 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 AGGF1P3-201ENST00000493675 1213 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 ENPP7P9-201ENST00000514456 627 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 AC012400.1-201ENST00000518452 381 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN12P56749 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 AL049830.4-201ENST00000555149 351 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 CD24P2-201ENST00000565486 219 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDN12P56749 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN12P56749 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 AL359091.2-201ENST00000609303 556 ntBASIC4.38□□□□□ -1.71
CLDN12P56749 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN12P56749 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN12P56749 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN12P56749 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN12P56749 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN12P56749 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN12P56749 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms