Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC073264.2-201ENST00000448886 166 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 NDUFA5P8-201ENST00000449019 346 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN6P56747 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN6P56747 RN7SL385P-201ENST00000468873 276 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CLDN6P56747 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN6P56747 AP006289.1-201ENST00000538089 277 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN6P56747 AC012414.7-202ENST00000622705 1090 ntBASIC5.01□□□□□ -1.61
CLDN6P56747 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN6P56747 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLDN6P56747 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN6P56747 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN6P56747 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN6P56747 NXF4-202ENST00000416098 1465 ntBASIC5□□□□□ -1.61
CLDN6P56747 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 PROS2P-201ENST00000474651 1951 ntBASIC5□□□□□ -1.61
CLDN6P56747 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5□□□□□ -1.61
CLDN6P56747 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
CLDN6P56747 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN6P56747 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 RNU6-673P-201ENST00000365084 104 ntBASIC5□□□□□ -1.61
CLDN6P56747 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN6P56747 DBIP1-201ENST00000401435 260 ntBASIC5□□□□□ -1.61
CLDN6P56747 RPS16P5-201ENST00000406501 404 ntBASIC5□□□□□ -1.61
CLDN6P56747 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5□□□□□ -1.61
CLDN6P56747 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5□□□□□ -1.61
CLDN6P56747 RNF10P1-201ENST00000418589 369 ntBASIC5□□□□□ -1.61
CLDN6P56747 AC013268.2-201ENST00000420753 337 ntBASIC5□□□□□ -1.61
CLDN6P56747 RPS4XP16-201ENST00000427198 791 ntBASIC5□□□□□ -1.61
CLDN6P56747 VTI1BP4-201ENST00000427516 527 ntBASIC5□□□□□ -1.61
CLDN6P56747 DNAJC19P7-201ENST00000428811 344 ntBASIC5□□□□□ -1.61
CLDN6P56747 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5□□□□□ -1.61
CLDN6P56747 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5□□□□□ -1.61
CLDN6P56747 IGBP1P3-201ENST00000447449 1000 ntBASIC5□□□□□ -1.61
CLDN6P56747 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5□□□□□ -1.61
CLDN6P56747 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5□□□□□ -1.61
CLDN6P56747 AC012123.2-201ENST00000485809 248 ntBASIC5□□□□□ -1.61
CLDN6P56747 AC140172.1-201ENST00000502928 141 ntBASIC5□□□□□ -1.61
CLDN6P56747 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5□□□□□ -1.61
CLDN6P56747 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5□□□□□ -1.61
CLDN6P56747 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 ATP5J2P6-201ENST00000565203 266 ntBASIC5□□□□□ -1.61
CLDN6P56747 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 AC125494.2-201ENST00000602431 657 ntBASIC5□□□□□ -1.61
CLDN6P56747 AC005252.1-201ENST00000604518 1063 ntBASIC5□□□□□ -1.61
CLDN6P56747 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5□□□□□ -1.61
CLDN6P56747 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CLDN6P56747 Z98755.1-201ENST00000407015 1384 ntBASIC5□□□□□ -1.61
CLDN6P56747 TOPORSLP1-201ENST00000467693 2102 ntBASIC5□□□□□ -1.61
CLDN6P56747 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN6P56747 AC093671.1-201ENST00000624981 2929 ntBASIC5□□□□□ -1.61
CLDN6P56747 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5□□□□□ -1.61
CLDN6P56747 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN6P56747 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CLDN6P56747 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CLDN6P56747 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN6P56747 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN6P56747 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN6P56747 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN6P56747 AC003973.3-201ENST00000624863 2822 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN6P56747 DDX18P6-201ENST00000450119 1997 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN6P56747 FAM3C2-201ENST00000312214 681 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 SNORA62-201ENST00000365493 153 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN6P56747 RN7SKP114-201ENST00000410327 279 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN6P56747 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 AC004074.1-201ENST00000421810 1063 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 OR10T1P-201ENST00000424327 947 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN6P56747 RPL36AP15-201ENST00000444514 266 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 MTND6P5-201ENST00000448266 512 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 TPT1P12-201ENST00000448968 492 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN6P56747 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN6P56747 RN7SL197P-201ENST00000466981 299 ntBASIC4.99□□□□□ -1.61
CLDN6P56747 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN6P56747 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN6P56747 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN6P56747 AC012400.1-201ENST00000518452 381 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms