Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 RNU6-1331P-201ENST00000363658 106 ntBASIC3.86□□□□□ -1.79
CMC4P56277 RNU1-146P-201ENST00000364015 165 ntBASIC3.86□□□□□ -1.79
CMC4P56277 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 MIR105-2-201ENST00000385083 81 ntBASIC3.86□□□□□ -1.79
CMC4P56277 MIR137-201ENST00000385223 102 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AL390316.1-201ENST00000406279 553 ntBASIC3.86□□□□□ -1.79
CMC4P56277 DUTP5-201ENST00000406790 469 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.86□□□□□ -1.79
CMC4P56277 NANOGP4-201ENST00000427230 913 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 KNOP1P3-201ENST00000446933 426 ntBASIC3.86□□□□□ -1.79
CMC4P56277 FAR2P1-206ENST00000449736 709 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AL035090.1-201ENST00000454835 332 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC009127.1-201ENST00000467090 155 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC098583.1-201ENST00000480875 255 ntBASIC3.86□□□□□ -1.79
CMC4P56277 RPS4XP1-201ENST00000482189 787 ntBASIC3.86□□□□□ -1.79
CMC4P56277 RN7SL814P-201ENST00000487715 300 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.86□□□□□ -1.79
CMC4P56277 RN7SL441P-201ENST00000492388 296 ntBASIC3.86□□□□□ -1.79
CMC4P56277 RPS4XP14-201ENST00000493072 781 ntBASIC3.86□□□□□ -1.79
CMC4P56277 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CMC4P56277 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.86□□□□□ -1.79
CMC4P56277 AC092490.3-201ENST00000545370 572 ntBASIC3.86□□□□□ -1.79
CMC4P56277 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 MIR4489-201ENST00000578869 62 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 AC008814.1-201ENST00000603797 406 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AC018695.5-201ENST00000605872 315 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AP005131.7-201ENST00000610087 611 ntBASIC3.86□□□□□ -1.79
CMC4P56277 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.86□□□□□ -1.79
CMC4P56277 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CMC4P56277 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CMC4P56277 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CMC4P56277 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 AC097461.1-201ENST00000568928 2821 ntBASIC3.86□□□□□ -1.79
CMC4P56277 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.86□□□□□ -1.79
CMC4P56277 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CMC4P56277 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.86□□□□□ -1.79
CMC4P56277 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CMC4P56277 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.85□□□□□ -1.79
CMC4P56277 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CMC4P56277 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CMC4P56277 RNA5SP305-201ENST00000362665 119 ntBASIC3.85□□□□□ -1.79
CMC4P56277 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.85□□□□□ -1.79
CMC4P56277 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.85□□□□□ -1.79
CMC4P56277 CHMP1B2P-201ENST00000399581 597 ntBASIC3.85□□□□□ -1.79
CMC4P56277 OR4K12P-201ENST00000406538 961 ntBASIC3.85□□□□□ -1.79
CMC4P56277 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.85□□□□□ -1.79
CMC4P56277 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.85□□□□□ -1.79
CMC4P56277 AC007738.1-201ENST00000413892 348 ntBASIC3.85□□□□□ -1.79
CMC4P56277 AC079809.1-201ENST00000415468 276 ntBASIC3.85□□□□□ -1.79
CMC4P56277 DPPA2P2-201ENST00000418220 897 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms