Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH13P55290 AC009501.3-201ENST00000605001 1352 ntBASIC5.23□□□□□ -1.57
CDH13P55290 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH13P55290 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CDH13P55290 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH13P55290 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH13P55290 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH13P55290 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 RNA5SP46-201ENST00000362370 120 ntBASIC5.22□□□□□ -1.57
CDH13P55290 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH13P55290 AL391422.1-201ENST00000402155 436 ntBASIC5.22□□□□□ -1.57
CDH13P55290 OR2AT2P-201ENST00000413438 905 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH13P55290 RPA2P2-201ENST00000419698 796 ntBASIC5.22□□□□□ -1.57
CDH13P55290 GNG5P5-201ENST00000420444 220 ntBASIC5.22□□□□□ -1.57
CDH13P55290 RPS3P2-201ENST00000421346 701 ntBASIC5.22□□□□□ -1.57
CDH13P55290 RPL34P3-201ENST00000421454 338 ntBASIC5.22□□□□□ -1.57
CDH13P55290 RPL17P35-201ENST00000432217 549 ntBASIC5.22□□□□□ -1.57
CDH13P55290 RPL12P17-201ENST00000432393 498 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC090018.1-201ENST00000434369 367 ntBASIC5.22□□□□□ -1.57
CDH13P55290 GSTM5P1-201ENST00000434751 660 ntBASIC5.22□□□□□ -1.57
CDH13P55290 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH13P55290 AC007000.2-201ENST00000442564 487 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH13P55290 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH13P55290 AL157827.1-201ENST00000447622 132 ntBASIC5.22□□□□□ -1.57
CDH13P55290 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH13P55290 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 AC058823.1-201ENST00000485315 474 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH13P55290 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 MTND3P24-201ENST00000506306 329 ntBASIC5.22□□□□□ -1.57
CDH13P55290 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH13P55290 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH13P55290 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH13P55290 SCARNA16.4-201ENST00000516956 187 ntBASIC5.22□□□□□ -1.57
CDH13P55290 IGHV3-63-201ENST00000518422 341 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH13P55290 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH13P55290 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 MTCYBP13-201ENST00000578634 1093 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 PRPF19P1-201ENST00000584766 898 ntBASIC5.22□□□□□ -1.57
CDH13P55290 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH13P55290 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 AC092474.3-201ENST00000603022 568 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC084373.1-201ENST00000603311 235 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AL671309.1-201ENST00000603750 544 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC006363.1-201ENST00000603806 463 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC100767.2-201ENST00000604840 693 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC015849.2-201ENST00000605738 409 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC034236.3-201ENST00000605999 461 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AC005972.3-201ENST00000606304 481 ntBASIC5.22□□□□□ -1.57
CDH13P55290 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 AC106730.3-201ENST00000624568 641 ntBASIC5.22□□□□□ -1.57
CDH13P55290 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH13P55290 UGT2B26P-201ENST00000508672 1613 ntBASIC5.22□□□□□ -1.57
CDH13P55290 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH13P55290 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH13P55290 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
CDH13P55290 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CDH13P55290 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDH13P55290 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH13P55290 OR9G4-201ENST00000302957 984 ntBASIC5.21□□□□□ -1.58
CDH13P55290 AC023490.2-201ENST00000359859 470 ntBASIC5.21□□□□□ -1.58
CDH13P55290 AC007618.1-201ENST00000366455 732 ntBASIC5.21□□□□□ -1.58
CDH13P55290 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH13P55290 SNORA48.4-201ENST00000391089 134 ntBASIC5.21□□□□□ -1.58
CDH13P55290 HMGB3P7-201ENST00000400214 611 ntBASIC5.21□□□□□ -1.58
CDH13P55290 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH13P55290 AC006065.1-201ENST00000422539 802 ntBASIC5.21□□□□□ -1.58
CDH13P55290 SRSF1P1-201ENST00000424058 520 ntBASIC5.21□□□□□ -1.58
CDH13P55290 AC023141.6-201ENST00000429418 337 ntBASIC5.21□□□□□ -1.58
CDH13P55290 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH13P55290 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH13P55290 TCEA1P3-201ENST00000443005 880 ntBASIC5.21□□□□□ -1.58
CDH13P55290 AL353898.1-201ENST00000444055 238 ntBASIC5.21□□□□□ -1.58
CDH13P55290 RPL36AP39-201ENST00000445859 318 ntBASIC5.21□□□□□ -1.58
CDH13P55290 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH13P55290 PRPF38AP1-201ENST00000451976 933 ntBASIC5.21□□□□□ -1.58
CDH13P55290 NDUFA5P5-201ENST00000468361 342 ntBASIC5.21□□□□□ -1.58
CDH13P55290 SUMO1P1-201ENST00000497904 306 ntBASIC5.21□□□□□ -1.58
CDH13P55290 EIF3KP3-201ENST00000514461 639 ntBASIC5.21□□□□□ -1.58
CDH13P55290 NRBF2P4-201ENST00000520874 850 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms