Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH4P55283 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDH4P55283 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH4P55283 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH4P55283 RN7SKP113-201ENST00000363891 295 ntBASIC5.28□□□□□ -1.56
CDH4P55283 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH4P55283 RN7SKP114-201ENST00000410327 279 ntBASIC5.28□□□□□ -1.56
CDH4P55283 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH4P55283 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH4P55283 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH4P55283 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH4P55283 CEACAMP7-201ENST00000444105 496 ntBASIC5.28□□□□□ -1.56
CDH4P55283 AC073850.1-201ENST00000449243 255 ntBASIC5.28□□□□□ -1.56
CDH4P55283 AC016687.1-201ENST00000482574 353 ntBASIC5.28□□□□□ -1.56
CDH4P55283 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH4P55283 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH4P55283 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH4P55283 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH4P55283 AC016559.2-201ENST00000510759 359 ntBASIC5.28□□□□□ -1.56
CDH4P55283 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.28□□□□□ -1.56
CDH4P55283 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH4P55283 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.28□□□□□ -1.56
CDH4P55283 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 AC044860.2-201ENST00000561005 179 ntBASIC5.28□□□□□ -1.56
CDH4P55283 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH4P55283 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH4P55283 BNIP3P35-201ENST00000604530 490 ntBASIC5.28□□□□□ -1.56
CDH4P55283 MIR7155-201ENST00000615925 56 ntBASIC5.28□□□□□ -1.56
CDH4P55283 AP002799.1-201ENST00000623552 423 ntBASIC5.28□□□□□ -1.56
CDH4P55283 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH4P55283 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH4P55283 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.28□□□□□ -1.56
CDH4P55283 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDH4P55283 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.28□□□□□ -1.56
CDH4P55283 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDH4P55283 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDH4P55283 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH4P55283 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 NXF4-202ENST00000416098 1465 ntBASIC5.27□□□□□ -1.57
CDH4P55283 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH4P55283 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDH4P55283 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDH4P55283 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH4P55283 PTMAP6-201ENST00000439110 327 ntBASIC5.27□□□□□ -1.57
CDH4P55283 RN7SL443P-201ENST00000464331 290 ntBASIC5.27□□□□□ -1.57
CDH4P55283 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH4P55283 RPL7AP6-201ENST00000477943 801 ntBASIC5.27□□□□□ -1.57
CDH4P55283 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH4P55283 AC013701.1-201ENST00000522657 465 ntBASIC5.27□□□□□ -1.57
CDH4P55283 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH4P55283 AC027369.5-201ENST00000533838 755 ntBASIC5.27□□□□□ -1.57
CDH4P55283 AC051619.2-201ENST00000559063 397 ntBASIC5.27□□□□□ -1.57
CDH4P55283 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH4P55283 MTCYBP13-201ENST00000578634 1093 ntBASIC5.27□□□□□ -1.57
CDH4P55283 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH4P55283 AC087763.1-201ENST00000603391 286 ntBASIC5.27□□□□□ -1.57
CDH4P55283 QTRT1P1-201ENST00000604344 1078 ntBASIC5.27□□□□□ -1.57
CDH4P55283 AL713998.2-201ENST00000604538 1198 ntBASIC5.27□□□□□ -1.57
CDH4P55283 AP005432.2-201ENST00000608162 586 ntBASIC5.27□□□□□ -1.57
CDH4P55283 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDH4P55283 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 CASC19-221ENST00000641309 1382 ntBASIC5.27□□□□□ -1.57
CDH4P55283 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDH4P55283 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH4P55283 AC109446.4-201ENST00000623235 2755 ntBASIC5.27□□□□□ -1.57
CDH4P55283 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH4P55283 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH4P55283 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH4P55283 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH4P55283 RNU6-249P-201ENST00000363016 102 ntBASIC5.26□□□□□ -1.57
CDH4P55283 AL645927.1-201ENST00000396783 406 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms