Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ARL2BPP10-201ENST00000446487 531 ntBASIC6.12□□□□□ -1.43
NUP98P52948 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 AC093267.1-201ENST00000489176 961 ntBASIC6.12□□□□□ -1.43
NUP98P52948 AC090058.1-201ENST00000498788 435 ntBASIC6.12□□□□□ -1.43
NUP98P52948 AP003080.1-202ENST00000526526 915 ntBASIC6.12□□□□□ -1.43
NUP98P52948 AC020910.2-201ENST00000603635 610 ntBASIC6.12□□□□□ -1.43
NUP98P52948 AC007497.1-201ENST00000610421 561 ntBASIC6.12□□□□□ -1.43
NUP98P52948 MIR6853-201ENST00000619642 74 ntBASIC6.12□□□□□ -1.43
NUP98P52948 AL359757.1-201ENST00000623176 255 ntBASIC6.12□□□□□ -1.43
NUP98P52948 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NUP98P52948 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 SMG1P6-201ENST00000532337 2930 ntBASIC6.12□□□□□ -1.43
NUP98P52948 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.12□□□□□ -1.43
NUP98P52948 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.12□□□□□ -1.43
NUP98P52948 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NUP98P52948 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP98P52948 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP98P52948 AC009643.2-201ENST00000603543 1448 ntBASIC6.11□□□□□ -1.43
NUP98P52948 AL357515.1-201ENST00000402967 542 ntBASIC6.11□□□□□ -1.43
NUP98P52948 GLUD1P9-201ENST00000420997 1173 ntBASIC6.11□□□□□ -1.43
NUP98P52948 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.11□□□□□ -1.43
NUP98P52948 RN7SL481P-201ENST00000477764 299 ntBASIC6.11□□□□□ -1.43
NUP98P52948 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP98P52948 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP98P52948 HPRT1P1-201ENST00000509498 657 ntBASIC6.11□□□□□ -1.43
NUP98P52948 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NUP98P52948 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP98P52948 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP98P52948 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP98P52948 AL133338.2-201ENST00000604292 736 ntBASIC6.11□□□□□ -1.43
NUP98P52948 AL121873.1-201ENST00000616013 524 ntBASIC6.11□□□□□ -1.43
NUP98P52948 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NUP98P52948 TLK1P1-201ENST00000456760 2440 ntBASIC6.11□□□□□ -1.43
NUP98P52948 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NUP98P52948 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP98P52948 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
NUP98P52948 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP98P52948 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP98P52948 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP98P52948 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.11□□□□□ -1.43
NUP98P52948 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP98P52948 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NUP98P52948 SUMO2P19-201ENST00000518920 295 ntBASIC6.11□□□□□ -1.43
NUP98P52948 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.11□□□□□ -1.43
NUP98P52948 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.11□□□□□ -1.43
NUP98P52948 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.11□□□□□ -1.43
NUP98P52948 ATP5J2P6-201ENST00000565203 266 ntBASIC6.11□□□□□ -1.43
NUP98P52948 AL034374.2-201ENST00000605281 548 ntBASIC6.11□□□□□ -1.43
NUP98P52948 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NUP98P52948 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NUP98P52948 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NUP98P52948 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP98P52948 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP98P52948 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP98P52948 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP98P52948 ABCC13-202ENST00000463099 3842 ntBASIC6.1□□□□□ -1.43
NUP98P52948 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
NUP98P52948 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP98P52948 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP98P52948 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NUP98P52948 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NUP98P52948 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP98P52948 AC034205.1-201ENST00000520621 638 ntBASIC6.1□□□□□ -1.43
NUP98P52948 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP98P52948 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.1□□□□□ -1.43
NUP98P52948 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP98P52948 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.1□□□□□ -1.43
NUP98P52948 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.1□□□□□ -1.43
NUP98P52948 SOCS5P3-201ENST00000425115 1576 ntBASIC6.1□□□□□ -1.43
NUP98P52948 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NUP98P52948 RBPJP2-201ENST00000618187 1444 ntBASIC6.09□□□□□ -1.43
NUP98P52948 DNM1P47-203ENST00000571780 12667 ntBASIC6.09□□□□□ -1.43
NUP98P52948 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP98P52948 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NUP98P52948 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP98P52948 COX6CP13-201ENST00000428703 226 ntBASIC6.09□□□□□ -1.43
NUP98P52948 AL450023.3-201ENST00000440592 271 ntBASIC6.09□□□□□ -1.43
NUP98P52948 CEACAMP6-201ENST00000452007 574 ntBASIC6.09□□□□□ -1.43
NUP98P52948 AC073358.1-201ENST00000505671 684 ntBASIC6.09□□□□□ -1.43
NUP98P52948 AC016559.2-201ENST00000510759 359 ntBASIC6.09□□□□□ -1.43
NUP98P52948 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP98P52948 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP98P52948 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.09□□□□□ -1.43
NUP98P52948 AL352984.2-202ENST00000613699 155 ntBASIC6.09□□□□□ -1.43
NUP98P52948 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP98P52948 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP98P52948 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.09□□□□□ -1.43
NUP98P52948 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.09□□□□□ -1.43
NUP98P52948 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NUP98P52948 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.09□□□□□ -1.44
NUP98P52948 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NUP98P52948 RPL18P10-201ENST00000425606 538 ntBASIC6.09□□□□□ -1.44
NUP98P52948 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
NUP98P52948 RPL23AP1-201ENST00000428990 471 ntBASIC6.09□□□□□ -1.44
NUP98P52948 NIP7P2-201ENST00000485801 544 ntBASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms