Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC109583.2-201ENST00000617367 129 ntBASIC5.63□□□□□ -1.51
SSR1P43307 CU639417.4-201ENST00000623928 207 ntBASIC5.63□□□□□ -1.51
SSR1P43307 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
SSR1P43307 FRG1EP-201ENST00000634469 770 ntBASIC5.63□□□□□ -1.51
SSR1P43307 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SSR1P43307 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSR1P43307 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSR1P43307 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSR1P43307 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.63□□□□□ -1.51
SSR1P43307 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.62□□□□□ -1.51
SSR1P43307 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.62□□□□□ -1.51
SSR1P43307 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SSR1P43307 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.62□□□□□ -1.51
SSR1P43307 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.62□□□□□ -1.51
SSR1P43307 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SSR1P43307 AL133388.1-201ENST00000404509 287 ntBASIC5.62□□□□□ -1.51
SSR1P43307 NCSTNP1-201ENST00000406229 144 ntBASIC5.62□□□□□ -1.51
SSR1P43307 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 AC013268.2-201ENST00000420753 337 ntBASIC5.62□□□□□ -1.51
SSR1P43307 SRSF1P1-201ENST00000424058 520 ntBASIC5.62□□□□□ -1.51
SSR1P43307 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
SSR1P43307 RPL23AP19-201ENST00000436229 369 ntBASIC5.62□□□□□ -1.51
SSR1P43307 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.62□□□□□ -1.51
SSR1P43307 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.62□□□□□ -1.51
SSR1P43307 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.62□□□□□ -1.51
SSR1P43307 AC105399.1-202ENST00000447303 205 ntBASIC5.62□□□□□ -1.51
SSR1P43307 AC011225.1-201ENST00000457751 369 ntBASIC5.62□□□□□ -1.51
SSR1P43307 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.62□□□□□ -1.51
SSR1P43307 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.62□□□□□ -1.51
SSR1P43307 AC027544.3-201ENST00000535082 757 ntBASIC5.62□□□□□ -1.51
SSR1P43307 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SSR1P43307 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.62□□□□□ -1.51
SSR1P43307 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 NMNAT1P5-201ENST00000559657 841 ntBASIC5.62□□□□□ -1.51
SSR1P43307 AC060766.1-201ENST00000590824 627 ntBASIC5.62□□□□□ -1.51
SSR1P43307 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SSR1P43307 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 AC090971.4-201ENST00000560291 1800 ntBASIC5.62□□□□□ -1.51
SSR1P43307 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSR1P43307 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SSR1P43307 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.61□□□□□ -1.51
SSR1P43307 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSR1P43307 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSR1P43307 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSR1P43307 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSR1P43307 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSR1P43307 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.61□□□□□ -1.51
SSR1P43307 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.61□□□□□ -1.51
SSR1P43307 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SSR1P43307 DBIP1-201ENST00000401435 260 ntBASIC5.61□□□□□ -1.51
SSR1P43307 MIR1271-201ENST00000408537 86 ntBASIC5.61□□□□□ -1.51
SSR1P43307 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.61□□□□□ -1.51
SSR1P43307 BMS1P17-202ENST00000416720 316 ntBASIC5.61□□□□□ -1.51
SSR1P43307 CYCSP10-201ENST00000417973 294 ntBASIC5.61□□□□□ -1.51
SSR1P43307 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSR1P43307 AL390119.1-201ENST00000440329 312 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AC016772.1-201ENST00000444170 1261 ntBASIC5.61□□□□□ -1.51
SSR1P43307 RPL5P16-201ENST00000471467 790 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AP000797.2-201ENST00000475768 606 ntBASIC5.61□□□□□ -1.51
SSR1P43307 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.61□□□□□ -1.51
SSR1P43307 HMGB1P44-201ENST00000508597 572 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.61□□□□□ -1.51
SSR1P43307 AC074087.1-201ENST00000512059 724 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AC135626.1-201ENST00000556983 435 ntBASIC5.61□□□□□ -1.51
SSR1P43307 RN7SL356P-201ENST00000582228 248 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.61□□□□□ -1.51
SSR1P43307 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.61□□□□□ -1.51
SSR1P43307 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSR1P43307 FO393422.1-201ENST00000603908 708 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AC016252.1-201ENST00000609721 474 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AL512356.3-201ENST00000623005 461 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AC074029.4-201ENST00000624796 1859 ntBASIC5.61□□□□□ -1.51
SSR1P43307 AP003400.3-201ENST00000624904 346 ntBASIC5.61□□□□□ -1.51
SSR1P43307 MIR1910-201ENST00000636955 80 ntBASIC5.61□□□□□ -1.51
SSR1P43307 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.61□□□□□ -1.51
SSR1P43307 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.61□□□□□ -1.51
SSR1P43307 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSR1P43307 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSR1P43307 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 TET1P1-201ENST00000426627 2301 ntBASIC5.6□□□□□ -1.51
SSR1P43307 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.6□□□□□ -1.51
SSR1P43307 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSR1P43307 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms