Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.42□□□□□ -1.54
TNFSF9P41273 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TNFSF9P41273 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TNFSF9P41273 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TNFSF9P41273 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 RPL21P67-201ENST00000402896 478 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 Y_RNA.625-201ENST00000411256 107 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AL139128.1-201ENST00000413921 941 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFSF9P41273 MGAT2P2-201ENST00000427194 797 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.41□□□□□ -1.54
TNFSF9P41273 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AC112498.1-201ENST00000444401 332 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AC004980.3-201ENST00000447046 365 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 RPS17P2-201ENST00000461663 408 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 AC090589.1-201ENST00000473109 362 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.41□□□□□ -1.54
TNFSF9P41273 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.41□□□□□ -1.54
TNFSF9P41273 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AC018695.5-201ENST00000605872 315 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 AL049539.1-201ENST00000611964 459 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 AC100827.5-201ENST00000615883 426 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 AC087821.1-201ENST00000623639 567 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TNFSF9P41273 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 AC022417.1-201ENST00000624768 1303 ntBASIC5.41□□□□□ -1.54
TNFSF9P41273 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFSF9P41273 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFSF9P41273 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TNFSF9P41273 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFSF9P41273 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TNFSF9P41273 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TNFSF9P41273 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 RNA5SP443-201ENST00000363083 132 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 AC013442.1-201ENST00000397347 228 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TNFSF9P41273 RPL37P18-201ENST00000411602 243 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 AC017078.1-201ENST00000416146 368 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF9P41273 RBMY2KP-201ENST00000418221 992 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 AC104837.2-201ENST00000427236 424 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 AL136231.1-201ENST00000429407 730 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 AC093414.1-201ENST00000434712 514 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 MRPS21P3-201ENST00000436696 262 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 SCAND3P1-201ENST00000439854 1060 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 RPS3AP41-201ENST00000462701 778 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 IGLV2-34-201ENST00000490007 283 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 MYL12BP2-201ENST00000503948 512 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFSF9P41273 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFSF9P41273 MORF4L1P3-201ENST00000525966 950 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 OR5D15P-201ENST00000531671 942 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 AL031658.2-201ENST00000616850 651 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFSF9P41273 AC132825.8-201ENST00000640783 297 ntBASIC5.4□□□□□ -1.54
TNFSF9P41273 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF9P41273 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF9P41273 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF9P41273 BX284613.1-201ENST00000452221 1641 ntBASIC5.4□□□□□ -1.55
TNFSF9P41273 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF9P41273 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF9P41273 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.4□□□□□ -1.55
TNFSF9P41273 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF9P41273 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF9P41273 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.55
TNFSF9P41273 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFSF9P41273 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFSF9P41273 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 357.3 ms