Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC116353.3-201ENST00000511215 249 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AC093755.1-201ENST00000512950 1023 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.33□□□□□ -1.4
LTBRP36941 MTCO2P32-201ENST00000514865 403 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 HMGN2P36-201ENST00000529541 409 ntBASIC6.33□□□□□ -1.4
LTBRP36941 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.33□□□□□ -1.4
LTBRP36941 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.33□□□□□ -1.4
LTBRP36941 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 AC068790.7-201ENST00000602347 528 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AL359704.2-201ENST00000604335 521 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AC096553.1-201ENST00000605169 829 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 AP000254.1-201ENST00000609934 520 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AL139418.1-201ENST00000613613 177 ntBASIC6.33□□□□□ -1.4
LTBRP36941 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.33□□□□□ -1.4
LTBRP36941 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LTBRP36941 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LTBRP36941 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LTBRP36941 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 AL356473.1-201ENST00000406203 1408 ntBASIC6.33□□□□□ -1.4
LTBRP36941 CASC19-206ENST00000641028 1430 ntBASIC6.33□□□□□ -1.4
LTBRP36941 MRRFP1-201ENST00000435941 1675 ntBASIC6.33□□□□□ -1.4
LTBRP36941 CR381670.1-201ENST00000624291 1693 ntBASIC6.33□□□□□ -1.4
LTBRP36941 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
LTBRP36941 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
LTBRP36941 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 PABPC1P6-201ENST00000445594 1829 ntBASIC6.32□□□□□ -1.4
LTBRP36941 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AL008638.3-201ENST00000623027 5182 ntBASIC6.32□□□□□ -1.4
LTBRP36941 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 AC138915.4-201ENST00000565549 4147 ntBASIC6.32□□□□□ -1.4
LTBRP36941 ENSAP3-201ENST00000312710 333 ntBASIC6.32□□□□□ -1.4
LTBRP36941 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
LTBRP36941 AL121835.1-201ENST00000404250 354 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC013404.1-201ENST00000413068 249 ntBASIC6.32□□□□□ -1.4
LTBRP36941 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 AC234064.1-201ENST00000436312 247 ntBASIC6.32□□□□□ -1.4
LTBRP36941 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.32□□□□□ -1.4
LTBRP36941 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 AL606490.1-201ENST00000452266 765 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 RN7SL329P-201ENST00000467740 299 ntBASIC6.32□□□□□ -1.4
LTBRP36941 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 AC114728.1-201ENST00000488289 483 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC092045.1-201ENST00000495716 1231 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
LTBRP36941 AC020937.1-201ENST00000519677 1013 ntBASIC6.32□□□□□ -1.4
LTBRP36941 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 AC084337.1-201ENST00000524809 686 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 OR10G5P-201ENST00000532733 358 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.32□□□□□ -1.4
LTBRP36941 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AL121766.1-201ENST00000547436 487 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 AC044913.1-201ENST00000557200 430 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LTBRP36941 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 MIR3912-201ENST00000577566 105 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC027229.1-201ENST00000583887 253 ntBASIC6.32□□□□□ -1.4
LTBRP36941 MIR4999-201ENST00000585029 91 ntBASIC6.32□□□□□ -1.4
LTBRP36941 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.32□□□□□ -1.4
LTBRP36941 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.32□□□□□ -1.4
LTBRP36941 AC141002.1-201ENST00000607025 279 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AL021368.3-201ENST00000607119 578 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AP000238.1-201ENST00000608759 426 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AC004223.4-201ENST00000612426 332 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AL021918.2-201ENST00000613415 194 ntBASIC6.32□□□□□ -1.4
LTBRP36941 AL158063.1-201ENST00000615349 536 ntBASIC6.32□□□□□ -1.4
LTBRP36941 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.32□□□□□ -1.4
LTBRP36941 AC022509.4-201ENST00000621404 572 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms