Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC010326.1-201ENST00000462726 602 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 RPL7P41-201ENST00000485823 957 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 AC090058.1-201ENST00000498788 435 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 AC093815.1-201ENST00000508637 280 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SCN4AP35499 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.01□□□□□ -1.45
SCN4AP35499 RPL12P25-202ENST00000598100 674 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 AC024941.1-201ENST00000612250 334 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 AC019206.1-201ENST00000621938 425 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SCN4AP35499 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.01□□□□□ -1.45
SCN4AP35499 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
SCN4AP35499 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6□□□□□ -1.45
SCN4AP35499 AC092451.3-201ENST00000625067 1343 ntBASIC6□□□□□ -1.45
SCN4AP35499 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 OR56B2P-202ENST00000641377 2453 ntBASIC6□□□□□ -1.45
SCN4AP35499 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 RNA5SP28-201ENST00000363841 119 ntBASIC6□□□□□ -1.45
SCN4AP35499 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 CYCSP11-201ENST00000436426 315 ntBASIC6□□□□□ -1.45
SCN4AP35499 RNA5SP392-201ENST00000516905 112 ntBASIC6□□□□□ -1.45
SCN4AP35499 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6□□□□□ -1.45
SCN4AP35499 MIR3939-201ENST00000582614 106 ntBASIC6□□□□□ -1.45
SCN4AP35499 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SCN4AP35499 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6□□□□□ -1.45
SCN4AP35499 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6□□□□□ -1.45
SCN4AP35499 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 AC099654.2-201ENST00000433031 1980 ntBASIC6□□□□□ -1.45
SCN4AP35499 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6□□□□□ -1.45
SCN4AP35499 AC010168.2-201ENST00000562691 5428 ntBASIC6□□□□□ -1.45
SCN4AP35499 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCN4AP35499 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.99□□□□□ -1.45
SCN4AP35499 AL136455.1-201ENST00000441083 1240 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 NOP56P2-201ENST00000447491 769 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 CEACAMP6-201ENST00000452007 574 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 EIF1P5-201ENST00000585002 234 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SCN4AP35499 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SCN4AP35499 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.99□□□□□ -1.45
SCN4AP35499 OR2B7P-201ENST00000429302 934 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 AC016831.4-201ENST00000438302 307 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.99□□□□□ -1.45
SCN4AP35499 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.99□□□□□ -1.45
SCN4AP35499 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.99□□□□□ -1.45
SCN4AP35499 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.99□□□□□ -1.45
SCN4AP35499 AC007224.1-201ENST00000564410 144 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 AP005119.2-201ENST00000579735 1105 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 MIR6853-201ENST00000619642 74 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 AC068446.1-201ENST00000556425 1549 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 AC097063.1-201ENST00000426714 1797 ntBASIC5.99□□□□□ -1.45
SCN4AP35499 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SCN4AP35499 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SCN4AP35499 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCN4AP35499 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN4AP35499 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN4AP35499 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 RNU4-39P-201ENST00000362455 127 ntBASIC5.98□□□□□ -1.45
SCN4AP35499 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.98□□□□□ -1.45
SCN4AP35499 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.98□□□□□ -1.45
SCN4AP35499 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.98□□□□□ -1.45
SCN4AP35499 FABP7P1-201ENST00000424004 391 ntBASIC5.98□□□□□ -1.45
SCN4AP35499 TRGV7-201ENST00000427089 353 ntBASIC5.98□□□□□ -1.45
SCN4AP35499 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.98□□□□□ -1.45
SCN4AP35499 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.98□□□□□ -1.45
SCN4AP35499 AC060780.2-201ENST00000589047 198 ntBASIC5.98□□□□□ -1.45
SCN4AP35499 AC108738.1-201ENST00000603703 237 ntBASIC5.98□□□□□ -1.45
SCN4AP35499 AC069542.2-201ENST00000624816 216 ntBASIC5.98□□□□□ -1.45
SCN4AP35499 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SCN4AP35499 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms