Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 Z93019.1-201ENST00000416450 973 ntBASIC5.69□□□□□ -1.5
RFC1P35251 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.69□□□□□ -1.5
RFC1P35251 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.69□□□□□ -1.5
RFC1P35251 HMGB3P10-201ENST00000434734 572 ntBASIC5.69□□□□□ -1.5
RFC1P35251 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC1P35251 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC1P35251 OR11I1P-201ENST00000486033 954 ntBASIC5.69□□□□□ -1.5
RFC1P35251 AC092902.1-201ENST00000486999 259 ntBASIC5.69□□□□□ -1.5
RFC1P35251 IGBP1P4-201ENST00000503202 879 ntBASIC5.69□□□□□ -1.5
RFC1P35251 UGT2A3P7-201ENST00000510485 734 ntBASIC5.69□□□□□ -1.5
RFC1P35251 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC1P35251 RN7SKP99-201ENST00000517028 307 ntBASIC5.69□□□□□ -1.5
RFC1P35251 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.69□□□□□ -1.5
RFC1P35251 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.69□□□□□ -1.5
RFC1P35251 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC1P35251 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC1P35251 AC104695.2-201ENST00000605056 775 ntBASIC5.69□□□□□ -1.5
RFC1P35251 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.69□□□□□ -1.5
RFC1P35251 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.69□□□□□ -1.5
RFC1P35251 OR51C1P-201ENST00000608504 942 ntBASIC5.69□□□□□ -1.5
RFC1P35251 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.69□□□□□ -1.5
RFC1P35251 AP003499.2-201ENST00000624100 483 ntBASIC5.69□□□□□ -1.5
RFC1P35251 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RFC1P35251 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RFC1P35251 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC1P35251 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC1P35251 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.69□□□□□ -1.5
RFC1P35251 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC1P35251 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC1P35251 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC1P35251 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC1P35251 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RFC1P35251 AC112198.2-201ENST00000426589 6996 ntBASIC5.68□□□□□ -1.5
RFC1P35251 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFC1P35251 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 RNU6-249P-201ENST00000363016 102 ntBASIC5.68□□□□□ -1.5
RFC1P35251 RNA5SP234-201ENST00000363916 119 ntBASIC5.68□□□□□ -1.5
RFC1P35251 SNORD51.1-201ENST00000365405 77 ntBASIC5.68□□□□□ -1.5
RFC1P35251 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFC1P35251 DBIP1-201ENST00000401435 260 ntBASIC5.68□□□□□ -1.5
RFC1P35251 RNA5SP178-201ENST00000410380 128 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC1P35251 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC1P35251 SRSF1P1-201ENST00000424058 520 ntBASIC5.68□□□□□ -1.5
RFC1P35251 MTCO1P45-201ENST00000431457 267 ntBASIC5.68□□□□□ -1.5
RFC1P35251 XKRY2-201ENST00000442362 1093 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.68□□□□□ -1.5
RFC1P35251 RPL35AP19-201ENST00000469425 329 ntBASIC5.68□□□□□ -1.5
RFC1P35251 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFC1P35251 AC092754.1-201ENST00000472975 479 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AC090638.1-201ENST00000498296 909 ntBASIC5.68□□□□□ -1.5
RFC1P35251 PCNAP1-201ENST00000505363 709 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AC021193.1-201ENST00000511607 420 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AC010374.2-201ENST00000512933 535 ntBASIC5.68□□□□□ -1.5
RFC1P35251 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC1P35251 HMGN1P9-201ENST00000515212 298 ntBASIC5.68□□□□□ -1.5
RFC1P35251 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC1P35251 AP004607.2-201ENST00000533949 322 ntBASIC5.68□□□□□ -1.5
RFC1P35251 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC1P35251 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC1P35251 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 AC022404.1-201ENST00000555320 273 ntBASIC5.68□□□□□ -1.5
RFC1P35251 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.68□□□□□ -1.5
RFC1P35251 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.68□□□□□ -1.5
RFC1P35251 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.68□□□□□ -1.5
RFC1P35251 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC1P35251 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.68□□□□□ -1.5
RFC1P35251 AC010245.2-201ENST00000606908 1167 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AC244107.2-201ENST00000611773 76 ntBASIC5.68□□□□□ -1.5
RFC1P35251 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
RFC1P35251 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 AL445493.3-201ENST00000619568 477 ntBASIC5.68□□□□□ -1.5
RFC1P35251 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 AP001002.2-201ENST00000625137 386 ntBASIC5.68□□□□□ -1.5
RFC1P35251 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFC1P35251 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.68□□□□□ -1.5
RFC1P35251 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFC1P35251 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
RFC1P35251 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.68□□□□□ -1.5
RFC1P35251 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
RFC1P35251 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RFC1P35251 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC1P35251 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RFC1P35251 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms