Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL4A5P29400 AC004076.2-201ENST00000620532 3323 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A5P29400 MFSD8-220ENST00000641243 1422 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL4A5P29400 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A5P29400 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A5P29400 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A5P29400 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A5P29400 AC092681.1-201ENST00000297369 291 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 MIR659-201ENST00000384963 97 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 UQCRBP1-201ENST00000421129 336 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A5P29400 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.86□□□□□ -1.47
COL4A5P29400 BUD31P1-201ENST00000521828 359 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A5P29400 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A5P29400 VN1R85P-201ENST00000601587 426 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL4A5P29400 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
COL4A5P29400 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 AC009951.1-201ENST00000623674 2614 ntBASIC5.86□□□□□ -1.47
COL4A5P29400 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A5P29400 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
COL4A5P29400 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL4A5P29400 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A5P29400 RPL7P32-201ENST00000457119 744 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 AC093840.1-201ENST00000511599 336 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 AC005618.4-201ENST00000625053 554 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A5P29400 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 RAD17P1-201ENST00000418130 2042 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A5P29400 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 AC007382.1-201ENST00000624376 2618 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A5P29400 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A5P29400 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL4A5P29400 RPL32P23-201ENST00000397237 405 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A5P29400 AC091180.1-201ENST00000462104 372 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 AC091167.1-201ENST00000492017 396 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.85□□□□□ -1.47
COL4A5P29400 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A5P29400 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 NPM1P6-201ENST00000521088 871 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 AC106785.1-201ENST00000565935 262 ntBASIC5.85□□□□□ -1.47
COL4A5P29400 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A5P29400 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A5P29400 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL4A5P29400 AC008758.3-201ENST00000507003 1829 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 AC010329.1-201ENST00000593903 8328 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A5P29400 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A5P29400 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A5P29400 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A5P29400 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A5P29400 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A5P29400 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A5P29400 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A5P29400 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
COL4A5P29400 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL4A5P29400 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A5P29400 RNU1-82P-201ENST00000390851 165 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 OR6C69P-201ENST00000394268 893 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 RN7SKP16-201ENST00000410180 299 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A5P29400 RPS27AP12-201ENST00000429552 465 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 AL359265.1-201ENST00000440296 795 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 AC108463.1-201ENST00000450258 347 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A5P29400 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL4A5P29400 AC073358.1-201ENST00000505671 684 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 RN7SKP248-201ENST00000516278 305 ntBASIC5.84□□□□□ -1.47
COL4A5P29400 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms