Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AL049830.4-201ENST00000555149 351 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC121758.1-202ENST00000556917 658 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 CYCSP40-201ENST00000575927 294 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 RN7SL708P-201ENST00000580952 299 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 AL008729.2-201ENST00000606393 473 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC096586.2-201ENST00000610260 441 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 SNX18P1Y-201ENST00000616231 511 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC131238.1-201ENST00000617135 328 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC111152.1-202ENST00000635848 339 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 AC008691.1-209ENST00000642094 814 ntBASIC4.45□□□□□ -1.7
HLA-DMAP28067 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DMAP28067 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DMAP28067 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DMAP28067 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DMAP28067 SMG1P6-201ENST00000532337 2930 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 RNU6-178P-201ENST00000384631 104 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 MIR195-201ENST00000385194 87 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 OR7E101P-201ENST00000400428 513 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 HSPA8P15-201ENST00000401676 786 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 LAP3P1-201ENST00000403648 294 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AL035079.1-201ENST00000405210 287 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 RN7SKP86-201ENST00000410454 332 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 CEACAMP8-201ENST00000413902 580 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 Z93019.1-201ENST00000416450 973 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AL035660.1-201ENST00000422041 222 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 EIF4EP1-201ENST00000422311 642 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 GSTM5P1-201ENST00000434751 660 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 Z80107.2-201ENST00000445127 392 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 RHEBP2-201ENST00000450289 600 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AL672138.1-201ENST00000450604 1015 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 AL035090.1-201ENST00000454835 332 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC093166.2-201ENST00000455969 1017 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 NIP7P2-201ENST00000485801 544 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC021006.1-201ENST00000489849 553 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC018797.1-201ENST00000510791 255 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DMAP28067 RNU6-615P-201ENST00000516065 106 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AP000648.1-201ENST00000529682 397 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC012616.1-201ENST00000600294 197 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC009597.2-201ENST00000604659 592 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AL162431.4-201ENST00000604674 411 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC022001.1-201ENST00000605193 268 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 PPATP2-201ENST00000605635 508 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AL031601.1-201ENST00000605702 394 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC140113.4-201ENST00000622087 222 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC138627.1-204ENST00000641894 765 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 AC114786.1-201ENST00000512892 1415 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 CASC19-206ENST00000641028 1430 ntBASIC4.44□□□□□ -1.7
HLA-DMAP28067 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DMAP28067 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DMAP28067 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DMAP28067 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DMAP28067 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 SNORD96B-201ENST00000386148 79 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 HMGB1P20-201ENST00000402555 677 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL512430.2-201ENST00000406786 339 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 SNORA81-201ENST00000408493 178 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL359885.1-201ENST00000415786 903 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms