Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 GAPDHP24-201ENST00000328713 983 ntBASIC7.48□□□□□ -1.21
VARSP26640 SNORA30B-201ENST00000365319 129 ntBASIC7.48□□□□□ -1.21
VARSP26640 Y_RNA.387-201ENST00000383918 102 ntBASIC7.48□□□□□ -1.21
VARSP26640 SNORA70I-201ENST00000384544 135 ntBASIC7.48□□□□□ -1.21
VARSP26640 RNA5SP297-201ENST00000391029 113 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.48□□□□□ -1.21
VARSP26640 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.48□□□□□ -1.21
VARSP26640 SNORA11C-201ENST00000408532 129 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC245054.2-201ENST00000415639 319 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC113618.1-201ENST00000416747 285 ntBASIC7.48□□□□□ -1.21
VARSP26640 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 AL953862.1-201ENST00000423016 168 ntBASIC7.48□□□□□ -1.21
VARSP26640 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.48□□□□□ -1.21
VARSP26640 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 GAPDHP34-201ENST00000432112 823 ntBASIC7.48□□□□□ -1.21
VARSP26640 AL954705.1-201ENST00000435277 559 ntBASIC7.48□□□□□ -1.21
VARSP26640 AL512882.1-201ENST00000436086 832 ntBASIC7.48□□□□□ -1.21
VARSP26640 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 MTCO1P14-201ENST00000441695 1559 ntBASIC7.48□□□□□ -1.21
VARSP26640 RPSAP48-201ENST00000466509 889 ntBASIC7.48□□□□□ -1.21
VARSP26640 RN7SL12P-201ENST00000473849 290 ntBASIC7.48□□□□□ -1.21
VARSP26640 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.48□□□□□ -1.21
VARSP26640 AC079594.1-201ENST00000489757 331 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC233724.1-201ENST00000503894 233 ntBASIC7.48□□□□□ -1.21
VARSP26640 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 AC034159.1-201ENST00000513885 583 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.48□□□□□ -1.21
VARSP26640 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 AC055876.1-202ENST00000567053 138 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 MRPS21P9-201ENST00000571150 257 ntBASIC7.48□□□□□ -1.21
VARSP26640 AL451049.1-201ENST00000608672 497 ntBASIC7.48□□□□□ -1.21
VARSP26640 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 MIR6745-201ENST00000612694 127 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC005618.4-201ENST00000625053 554 ntBASIC7.48□□□□□ -1.21
VARSP26640 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 AC010653.3-201ENST00000635332 232 ntBASIC7.48□□□□□ -1.21
VARSP26640 AC138649.5-201ENST00000637456 137 ntBASIC7.48□□□□□ -1.21
VARSP26640 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 AC090771.1-201ENST00000585803 1618 ntBASIC7.48□□□□□ -1.21
VARSP26640 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.48□□□□□ -1.21
VARSP26640 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.48□□□□□ -1.21
VARSP26640 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
VARSP26640 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.48□□□□□ -1.21
VARSP26640 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 AC003985.2-201ENST00000562268 1669 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 AL359091.1-201ENST00000449048 1734 ntBASIC7.47□□□□□ -1.21
VARSP26640 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 AC100810.3-201ENST00000633189 2240 ntBASIC7.47□□□□□ -1.21
VARSP26640 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 Y_RNA.184-201ENST00000363884 108 ntBASIC7.47□□□□□ -1.21
VARSP26640 RNU6-282P-201ENST00000365357 103 ntBASIC7.47□□□□□ -1.21
VARSP26640 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
VARSP26640 SNORA32.2-201ENST00000384049 122 ntBASIC7.47□□□□□ -1.21
VARSP26640 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
VARSP26640 TMBIM7P-201ENST00000418074 855 ntBASIC7.47□□□□□ -1.21
VARSP26640 GRPEL2P2-201ENST00000421856 670 ntBASIC7.47□□□□□ -1.21
VARSP26640 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.47□□□□□ -1.21
VARSP26640 NANOGP6-201ENST00000429190 847 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC109583.1-201ENST00000432156 268 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.47□□□□□ -1.21
VARSP26640 HBBP1-201ENST00000433329 439 ntBASIC7.47□□□□□ -1.21
VARSP26640 GAPDHP32-201ENST00000433816 998 ntBASIC7.47□□□□□ -1.21
VARSP26640 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.47□□□□□ -1.21
VARSP26640 RPL5P25-201ENST00000441148 775 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC015983.1-201ENST00000441577 373 ntBASIC7.47□□□□□ -1.21
VARSP26640 RPL23AP16-201ENST00000441715 421 ntBASIC7.47□□□□□ -1.21
VARSP26640 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.47□□□□□ -1.21
VARSP26640 SUMO1P2-201ENST00000452524 304 ntBASIC7.47□□□□□ -1.21
VARSP26640 PTMAP1-205ENST00000455552 325 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC103563.5-201ENST00000455643 364 ntBASIC7.47□□□□□ -1.21
VARSP26640 RN7SL791P-201ENST00000467868 295 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC027575.1-201ENST00000481064 460 ntBASIC7.47□□□□□ -1.21
VARSP26640 AC023194.1-201ENST00000493084 308 ntBASIC7.47□□□□□ -1.21
VARSP26640 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms