Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC016550.1-201ENST00000505348 785 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC010376.1-201ENST00000522101 334 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.2□□□□□ -1.42
POLR2AP24928 AC027216.1-201ENST00000577726 685 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 DUXAP3-201ENST00000603616 594 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AC245389.2-201ENST00000616023 576 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AC242843.1-201ENST00000618702 573 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 AP003400.3-201ENST00000624904 346 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
POLR2AP24928 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 WBP11P1-201ENST00000562560 1931 ntBASIC6.2□□□□□ -1.42
POLR2AP24928 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
POLR2AP24928 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
POLR2AP24928 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 AL031123.3-201ENST00000623345 1837 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
POLR2AP24928 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 RPS4XP9-201ENST00000405151 780 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 USP9YP11-201ENST00000427537 717 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 MRPL50P1-201ENST00000431951 384 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 AL365220.1-201ENST00000432923 399 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 AL161722.2-201ENST00000434731 981 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 AC073410.1-201ENST00000435125 589 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 TXNP2-201ENST00000443918 295 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 REG1CP-206ENST00000447469 496 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 AL445669.2-201ENST00000454425 421 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.19□□□□□ -1.42
POLR2AP24928 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
POLR2AP24928 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.19□□□□□ -1.42
POLR2AP24928 GMCL1P2-201ENST00000605230 823 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
POLR2AP24928 AP002967.1-201ENST00000624203 539 ntBASIC6.19□□□□□ -1.42
POLR2AP24928 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.19□□□□□ -1.42
POLR2AP24928 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.19□□□□□ -1.42
POLR2AP24928 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.19□□□□□ -1.42
POLR2AP24928 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.19□□□□□ -1.42
POLR2AP24928 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.19□□□□□ -1.42
POLR2AP24928 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.19□□□□□ -1.42
POLR2AP24928 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.19□□□□□ -1.42
POLR2AP24928 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
POLR2AP24928 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
POLR2AP24928 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.19□□□□□ -1.42
POLR2AP24928 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.19□□□□□ -1.42
POLR2AP24928 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
POLR2AP24928 U3.3-201ENST00000362986 216 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 RCC2P2-201ENST00000422174 918 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.18□□□□□ -1.42
POLR2AP24928 USP9YP28-201ENST00000435142 589 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 MTCYBP21-201ENST00000443300 1113 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.18□□□□□ -1.42
POLR2AP24928 AC063943.1-201ENST00000465434 453 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 RN7SL188P-201ENST00000469842 285 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC005412.2-201ENST00000492004 341 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC026402.1-201ENST00000513642 170 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 GAPDHP62-201ENST00000515313 990 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
POLR2AP24928 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 AC027176.2-201ENST00000559166 746 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC233266.2-201ENST00000567067 528 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.18□□□□□ -1.42
POLR2AP24928 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.18□□□□□ -1.42
POLR2AP24928 AL513327.3-201ENST00000602618 469 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC093424.1-201ENST00000604999 338 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC026367.3-201ENST00000619032 590 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 CR381572.2-201ENST00000624852 397 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
POLR2AP24928 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
POLR2AP24928 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
POLR2AP24928 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.18□□□□□ -1.42
POLR2AP24928 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 SNORA62-201ENST00000365493 153 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 RNA5SP332-201ENST00000391063 115 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 MIR1182-201ENST00000408363 97 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.18□□□□□ -1.42
POLR2AP24928 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.18□□□□□ -1.42
POLR2AP24928 MORF4L1P6-201ENST00000418771 268 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 MTND4LP14-201ENST00000429447 288 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.18□□□□□ -1.42
POLR2AP24928 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 ATP5LP5-201ENST00000483050 299 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC092902.1-201ENST00000486999 259 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 RNA5SP43-201ENST00000516559 110 ntBASIC6.18□□□□□ -1.42
POLR2AP24928 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.18□□□□□ -1.42
POLR2AP24928 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.18□□□□□ -1.42
POLR2AP24928 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
POLR2AP24928 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
POLR2AP24928 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.18□□□□□ -1.42
POLR2AP24928 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms