Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFRAP16234 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFRAP16234 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDGFRAP16234 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFRAP16234 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDGFRAP16234 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFRAP16234 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 RNU6-729P-201ENST00000384399 107 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 MIR105-1-201ENST00000385222 81 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.55□□□□□ -1.52
PDGFRAP16234 NPM1P26-201ENST00000426339 738 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 HSPD1P12-201ENST00000429127 1069 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 FAM96AP1-201ENST00000430879 482 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 NPM1P19-201ENST00000450070 712 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 AC002553.2-201ENST00000453217 340 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 CBX1P2-201ENST00000453841 458 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 RPL15P21-201ENST00000495592 567 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFRAP16234 IMPA1P1-201ENST00000510718 842 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 RNU6-941P-201ENST00000516346 108 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFRAP16234 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFRAP16234 IGLV2-28-201ENST00000520681 304 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 OR7E10P-201ENST00000526420 991 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFRAP16234 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFRAP16234 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.55□□□□□ -1.52
PDGFRAP16234 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFRAP16234 AL512329.2-201ENST00000607350 548 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFRAP16234 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PDGFRAP16234 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFRAP16234 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 PABPC1P6-201ENST00000445594 1829 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 AC133552.1-201ENST00000569988 4007 ntBASIC5.55□□□□□ -1.52
PDGFRAP16234 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFRAP16234 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC107021.2-201ENST00000567714 2095 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 OR55B1P-203ENST00000641518 2602 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFRAP16234 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 RNA5SP183-201ENST00000362452 119 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 U3.7-201ENST00000363668 216 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDGFRAP16234 RNU1-149P-201ENST00000390870 161 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC079809.1-201ENST00000415468 276 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 NOP56P2-201ENST00000447491 769 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 RBMY2TP-201ENST00000451162 947 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 DNAJB5P1-201ENST00000454004 806 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 RPL7AP10-201ENST00000481016 791 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 RPL7P41-201ENST00000485823 957 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.54□□□□□ -1.52
PDGFRAP16234 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC004825.1-201ENST00000555068 586 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFRAP16234 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC006272.2-201ENST00000594725 163 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC002069.2-201ENST00000603580 883 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 AC006363.1-201ENST00000603806 463 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 AC009597.2-201ENST00000604659 592 ntBASIC5.54□□□□□ -1.52
PDGFRAP16234 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDGFRAP16234 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDGFRAP16234 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFRAP16234 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFRAP16234 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PDGFRAP16234 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFRAP16234 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFRAP16234 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFRAP16234 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms