Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AL353625.1-202ENST00000366273 571 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AL672167.2-201ENST00000377164 879 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 SNORA2.3-201ENST00000383920 135 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC013429.2-201ENST00000418798 781 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC093655.2-201ENST00000425735 631 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 MTCO1P51-201ENST00000427672 1060 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC009238.2-201ENST00000431026 355 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 TPTE2P1-204ENST00000435256 593 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 SPRYD7P1-201ENST00000443861 570 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 RN7SL443P-201ENST00000464331 290 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 OR2AO1P-201ENST00000476497 403 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC117394.1-201ENST00000477323 567 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 RPL7P39-201ENST00000481157 744 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC134349.2-201ENST00000535136 910 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AL049779.2-201ENST00000553847 315 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AL049874.4-201ENST00000557593 255 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC117490.2-201ENST00000610042 594 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AL159169.2-201ENST00000610061 1269 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 CASC19-264ENST00000641912 1184 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 AC008079.2-201ENST00000623543 20396 ntBASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
IGHV3-43DP0DP04 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.21□□□□□ -1.73
IGHV3-43DP0DP04 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
IGHV3-43DP0DP04 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
IGHV3-43DP0DP04 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.21□□□□□ -1.73
IGHV3-43DP0DP04 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.21□□□□□ -1.73
IGHV3-43DP0DP04 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
IGHV3-43DP0DP04 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC011755.1-201ENST00000623763 2049 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 U3.2-201ENST00000362981 210 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 RN7SKP162-201ENST00000363605 345 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 RN7SKP160-201ENST00000363804 340 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 RN7SKP126-201ENST00000411143 300 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 SEPT7P8-201ENST00000413308 775 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 CHEK2P5-201ENST00000423877 246 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 RPS4XP16-201ENST00000427198 791 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC093166.2-201ENST00000455969 1017 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 COX6B1P2-201ENST00000489624 230 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC005412.2-201ENST00000492004 341 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 RN7SL101P-201ENST00000496350 279 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 ENPP7P11-201ENST00000505915 627 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 RPL7L1P4-201ENST00000513004 707 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC024940.3-201ENST00000538551 316 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC012146.2-201ENST00000576545 416 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 FAM72A-208ENST00000607379 1139 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 AP005131.7-201ENST00000610087 611 ntBASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
IGHV3-43DP0DP04 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms