Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC090022.1-201ENST00000546569 311 ntBASIC4.59□□□□□ -1.67
UBCP0CG48 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UBCP0CG48 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.59□□□□□ -1.67
UBCP0CG48 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
UBCP0CG48 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.59□□□□□ -1.67
UBCP0CG48 AC015720.2-201ENST00000567709 334 ntBASIC4.59□□□□□ -1.67
UBCP0CG48 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.59□□□□□ -1.67
UBCP0CG48 MTCO1P22-201ENST00000604619 1360 ntBASIC4.59□□□□□ -1.67
UBCP0CG48 AC018695.5-201ENST00000605872 315 ntBASIC4.59□□□□□ -1.67
UBCP0CG48 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
UBCP0CG48 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.59□□□□□ -1.67
UBCP0CG48 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.59□□□□□ -1.67
UBCP0CG48 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
UBCP0CG48 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.59□□□□□ -1.67
UBCP0CG48 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBCP0CG48 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBCP0CG48 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
UBCP0CG48 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.59□□□□□ -1.68
UBCP0CG48 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.59□□□□□ -1.68
UBCP0CG48 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
UBCP0CG48 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
UBCP0CG48 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
UBCP0CG48 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UBCP0CG48 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
UBCP0CG48 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
UBCP0CG48 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UBCP0CG48 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 RNA5SP319-201ENST00000362768 119 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 RNU1-74P-201ENST00000384108 171 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.58□□□□□ -1.68
UBCP0CG48 RN7SKP240-201ENST00000410583 375 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.58□□□□□ -1.68
UBCP0CG48 SLC20A1P1-201ENST00000413906 956 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 OR6E1P-201ENST00000414424 923 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 AC013470.3-201ENST00000420252 1194 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.58□□□□□ -1.68
UBCP0CG48 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 AC002504.1-201ENST00000438281 691 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 AL031584.1-201ENST00000447169 754 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.58□□□□□ -1.68
UBCP0CG48 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.58□□□□□ -1.68
UBCP0CG48 MTCYBP14-201ENST00000457471 715 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 RN7SL168P-201ENST00000463821 279 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.58□□□□□ -1.68
UBCP0CG48 RPL37P23-201ENST00000492641 294 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 RN7SL649P-201ENST00000496974 275 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.58□□□□□ -1.68
UBCP0CG48 NIFKP7-201ENST00000503365 834 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 HMGB3P16-201ENST00000508037 287 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 RN7SKP46-201ENST00000515942 234 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 RNA5SP473-201ENST00000516402 125 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 HMGB1P40-201ENST00000525121 540 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.58□□□□□ -1.68
UBCP0CG48 AC008814.1-201ENST00000603797 406 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 MIR6071-201ENST00000616741 78 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 AC015914.2-201ENST00000618167 288 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 MTCO1P1-201ENST00000624263 1081 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
UBCP0CG48 SAMMSON-209ENST00000641222 1100 ntBASIC4.58□□□□□ -1.68
UBCP0CG48 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
UBCP0CG48 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBCP0CG48 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBCP0CG48 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
UBCP0CG48 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBCP0CG48 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBCP0CG48 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
UBCP0CG48 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UBCP0CG48 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UBCP0CG48 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UBCP0CG48 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
UBCP0CG48 MIR133B-201ENST00000362210 119 ntBASIC4.57□□□□□ -1.68
UBCP0CG48 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UBCP0CG48 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
UBCP0CG48 MIR105-1-201ENST00000385222 81 ntBASIC4.57□□□□□ -1.68
UBCP0CG48 RNA5SP105-201ENST00000391123 113 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms