Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.21□□□□□ -1.57
CAPN1P07384 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CAPN1P07384 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CAPN1P07384 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CAPN1P07384 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.21□□□□□ -1.57
CAPN1P07384 AL138820.1-201ENST00000617901 5305 ntBASIC5.21□□□□□ -1.57
CAPN1P07384 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CAPN1P07384 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN1P07384 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 RNU6-1331P-201ENST00000363658 106 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 SNORA48.4-201ENST00000391089 134 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 SEPT7P8-201ENST00000413308 775 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AL139148.1-201ENST00000427122 680 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 CYCSP6-201ENST00000434498 302 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 OR52B5P-201ENST00000435337 951 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 PTMAP6-201ENST00000439110 327 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 EEF1B2P5-201ENST00000444820 548 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN1P07384 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.21□□□□□ -1.58
CAPN1P07384 OR52E3P-201ENST00000452083 936 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AL035090.1-201ENST00000454835 332 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 RN7SL172P-201ENST00000460535 303 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 AC093827.1-201ENST00000480094 861 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 RPS12P31-201ENST00000491419 398 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AL133372.1-201ENST00000493565 745 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN1P07384 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN1P07384 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 SCARNA16.4-201ENST00000516956 187 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 RN7SKP99-201ENST00000517028 307 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN1P07384 AL049779.2-201ENST00000553847 315 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 AL158062.1-201ENST00000619632 745 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN1P07384 AP003400.3-201ENST00000624904 346 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.21□□□□□ -1.58
CAPN1P07384 FRG1EP-201ENST00000634469 770 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 OR52B5P-202ENST00000641118 1110 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 SAMMSON-209ENST00000641222 1100 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 SAMMSON-227ENST00000642114 1199 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN1P07384 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN1P07384 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN1P07384 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 TTC39DP-201ENST00000416781 1688 ntBASIC5.21□□□□□ -1.58
CAPN1P07384 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.21□□□□□ -1.58
CAPN1P07384 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.21□□□□□ -1.58
CAPN1P07384 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CAPN1P07384 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CAPN1P07384 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CAPN1P07384 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 U3.2-201ENST00000362981 210 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 RN7SKP273-201ENST00000411392 314 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.2□□□□□ -1.58
CAPN1P07384 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.2□□□□□ -1.58
CAPN1P07384 AC090018.1-201ENST00000434369 367 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC245047.2-201ENST00000441060 530 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AL672138.1-201ENST00000450604 1015 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.2□□□□□ -1.58
CAPN1P07384 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 RPL7P39-201ENST00000481157 744 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC079841.1-201ENST00000481228 950 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC004815.1-201ENST00000484185 331 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AGGF1P3-201ENST00000493675 1213 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC072052.1-201ENST00000496556 306 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 RPEP1-201ENST00000504507 658 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 OR5M14P-201ENST00000506803 618 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC016559.2-201ENST00000510759 359 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AL671862.1-201ENST00000515851 349 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AP004607.2-201ENST00000533949 322 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.2□□□□□ -1.58
CAPN1P07384 AL121839.1-201ENST00000556233 1185 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.2□□□□□ -1.58
CAPN1P07384 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 MTCYBP13-201ENST00000578634 1093 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 RN7SL356P-201ENST00000582228 248 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC109583.2-201ENST00000617367 129 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 AC091932.2-201ENST00000623014 291 ntBASIC5.2□□□□□ -1.58
CAPN1P07384 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CAPN1P07384 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CAPN1P07384 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.2□□□□□ -1.58
CAPN1P07384 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CAPN1P07384 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CAPN1P07384 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms