Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.03□□□□□ -1.44
COL1A1P02452 HMGB1P4-201ENST00000455362 567 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 RN7SL441P-201ENST00000492388 296 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.03□□□□□ -1.44
COL1A1P02452 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.03□□□□□ -1.44
COL1A1P02452 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.03□□□□□ -1.44
COL1A1P02452 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL1A1P02452 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.03□□□□□ -1.44
COL1A1P02452 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.03□□□□□ -1.44
COL1A1P02452 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.03□□□□□ -1.44
COL1A1P02452 AC087821.1-201ENST00000623639 567 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 CR381572.2-201ENST00000624852 397 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL1A1P02452 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.03□□□□□ -1.44
COL1A1P02452 ADAM24P-201ENST00000398655 2101 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.03□□□□□ -1.44
COL1A1P02452 AC140134.1-201ENST00000511830 3544 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL1A1P02452 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
COL1A1P02452 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.03□□□□□ -1.44
COL1A1P02452 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.03□□□□□ -1.44
COL1A1P02452 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.03□□□□□ -1.44
COL1A1P02452 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.03□□□□□ -1.44
COL1A1P02452 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
COL1A1P02452 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL1A1P02452 SNORA70.2-201ENST00000364506 135 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.44
COL1A1P02452 RNA5SP332-201ENST00000391063 115 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 U3.30-201ENST00000391308 210 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 BX510359.2-201ENST00000417920 305 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 PRPF38AP1-201ENST00000451976 933 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AC234781.3-201ENST00000452540 973 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 RPL23AP56-201ENST00000460778 453 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 RN7SL319P-201ENST00000480656 221 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.02□□□□□ -1.44
COL1A1P02452 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.02□□□□□ -1.44
COL1A1P02452 TTC41P-205ENST00000551270 3963 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AC040958.1-201ENST00000561102 201 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AC010928.1-201ENST00000592477 1447 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AP001521.2-201ENST00000608772 546 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AL022401.1-201ENST00000619498 108 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AC091932.2-201ENST00000623014 291 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 AC010480.1-201ENST00000624823 684 ntBASIC6.02□□□□□ -1.44
COL1A1P02452 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 AL022323.4-201ENST00000623980 13120 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.02□□□□□ -1.45
COL1A1P02452 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 AL669831.5-218ENST00000591702 1873 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL1A1P02452 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 AL136116.2-201ENST00000404020 785 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 RSU1P3-201ENST00000412878 835 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 RPL12P43-201ENST00000420608 499 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.02□□□□□ -1.45
COL1A1P02452 AL450023.3-201ENST00000440592 271 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 SLC25A18P1-201ENST00000449385 454 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 GAPDHP14-201ENST00000450472 937 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.02□□□□□ -1.45
COL1A1P02452 AURKAPS2-201ENST00000454983 333 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 RPS23P7-201ENST00000466210 444 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 RN7SL817P-201ENST00000480777 288 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.02□□□□□ -1.45
COL1A1P02452 HPRT1P1-201ENST00000509498 657 ntBASIC6.02□□□□□ -1.45
COL1A1P02452 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.02□□□□□ -1.45
COL1A1P02452 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.02□□□□□ -1.45
COL1A1P02452 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL1A1P02452 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.01□□□□□ -1.45
COL1A1P02452 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.01□□□□□ -1.45
COL1A1P02452 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 AC004817.4-201ENST00000602396 3625 ntBASIC6.01□□□□□ -1.45
COL1A1P02452 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.01□□□□□ -1.45
COL1A1P02452 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.01□□□□□ -1.45
COL1A1P02452 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.01□□□□□ -1.45
COL1A1P02452 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL1A1P02452 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL1A1P02452 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms