Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TNFP01375 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TNFP01375 AL035079.1-201ENST00000405210 287 ntBASIC4.94□□□□□ -1.62
TNFP01375 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFP01375 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFP01375 MGAT2P2-201ENST00000427194 797 ntBASIC4.94□□□□□ -1.62
TNFP01375 RPL5P2-201ENST00000429598 854 ntBASIC4.94□□□□□ -1.62
TNFP01375 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.94□□□□□ -1.62
TNFP01375 BX323845.1-201ENST00000432417 179 ntBASIC4.94□□□□□ -1.62
TNFP01375 AC008072.1-201ENST00000434254 824 ntBASIC4.94□□□□□ -1.62
TNFP01375 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.94□□□□□ -1.62
TNFP01375 MED28P3-201ENST00000444288 531 ntBASIC4.94□□□□□ -1.62
TNFP01375 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFP01375 GAPDHP14-201ENST00000450472 937 ntBASIC4.94□□□□□ -1.62
TNFP01375 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFP01375 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.94□□□□□ -1.62
TNFP01375 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFP01375 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFP01375 NDUFB4P11-201ENST00000560510 395 ntBASIC4.94□□□□□ -1.62
TNFP01375 AC009117.1-201ENST00000563948 554 ntBASIC4.94□□□□□ -1.62
TNFP01375 BGLT3-201ENST00000564523 994 ntBASIC4.94□□□□□ -1.62
TNFP01375 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.94□□□□□ -1.62
TNFP01375 AL031320.1-201ENST00000604177 357 ntBASIC4.94□□□□□ -1.62
TNFP01375 AC016590.3-201ENST00000611171 753 ntBASIC4.94□□□□□ -1.62
TNFP01375 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.94□□□□□ -1.62
TNFP01375 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
TNFP01375 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
TNFP01375 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.94□□□□□ -1.62
TNFP01375 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TNFP01375 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TNFP01375 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.94□□□□□ -1.62
TNFP01375 AC005005.4-201ENST00000623789 16698 ntBASIC4.93□□□□□ -1.62
TNFP01375 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
TNFP01375 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TNFP01375 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TNFP01375 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TNFP01375 GPS2P1-201ENST00000411761 986 ntBASIC4.93□□□□□ -1.62
TNFP01375 PCNPP4-201ENST00000414817 517 ntBASIC4.93□□□□□ -1.62
TNFP01375 AF186996.5-201ENST00000418098 904 ntBASIC4.93□□□□□ -1.62
TNFP01375 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.93□□□□□ -1.62
TNFP01375 USP9YP9-201ENST00000429406 715 ntBASIC4.93□□□□□ -1.62
TNFP01375 OR52J1P-201ENST00000450596 932 ntBASIC4.93□□□□□ -1.62
TNFP01375 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.93□□□□□ -1.62
TNFP01375 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TNFP01375 GAPDHP56-201ENST00000506031 988 ntBASIC4.93□□□□□ -1.62
TNFP01375 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.93□□□□□ -1.62
TNFP01375 AC097486.1-201ENST00000515331 210 ntBASIC4.93□□□□□ -1.62
TNFP01375 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.93□□□□□ -1.62
TNFP01375 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.93□□□□□ -1.62
TNFP01375 HMGN2P47-201ENST00000559378 272 ntBASIC4.93□□□□□ -1.62
TNFP01375 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.93□□□□□ -1.62
TNFP01375 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TNFP01375 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TNFP01375 EIF1P5-201ENST00000585002 234 ntBASIC4.93□□□□□ -1.62
TNFP01375 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.93□□□□□ -1.62
TNFP01375 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.93□□□□□ -1.62
TNFP01375 RNA5SP439-201ENST00000617595 124 ntBASIC4.93□□□□□ -1.62
TNFP01375 SDAD1P1-202ENST00000524156 2051 ntBASIC4.93□□□□□ -1.62
TNFP01375 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TNFP01375 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TNFP01375 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.93□□□□□ -1.62
TNFP01375 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
TNFP01375 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.93□□□□□ -1.62
TNFP01375 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TNFP01375 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TNFP01375 CASC19-260ENST00000641828 2001 ntBASIC4.92□□□□□ -1.62
TNFP01375 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.92□□□□□ -1.62
TNFP01375 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TNFP01375 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.92□□□□□ -1.62
TNFP01375 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TNFP01375 MIR133A2-201ENST00000347538 102 ntBASIC4.92□□□□□ -1.62
TNFP01375 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TNFP01375 RN7SKP115-201ENST00000363177 317 ntBASIC4.92□□□□□ -1.62
TNFP01375 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TNFP01375 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.92□□□□□ -1.62
TNFP01375 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TNFP01375 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TNFP01375 AL136116.2-201ENST00000404020 785 ntBASIC4.92□□□□□ -1.62
TNFP01375 SNORA77-201ENST00000408716 125 ntBASIC4.92□□□□□ -1.62
TNFP01375 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.92□□□□□ -1.62
TNFP01375 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.92□□□□□ -1.62
TNFP01375 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.92□□□□□ -1.62
TNFP01375 AC090602.1-201ENST00000469695 252 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms