Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 AC235565.1-201ENST00000456962 1325 ntBASIC4□□□□□ -1.77
SSSCA1O60232 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4□□□□□ -1.77
SSSCA1O60232 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 DHX9P1-201ENST00000436565 3076 ntBASIC4□□□□□ -1.77
SSSCA1O60232 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4□□□□□ -1.77
SSSCA1O60232 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4□□□□□ -1.77
SSSCA1O60232 RNU1-83P-201ENST00000363426 164 ntBASIC4□□□□□ -1.77
SSSCA1O60232 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4□□□□□ -1.77
SSSCA1O60232 MIR600-201ENST00000385007 98 ntBASIC4□□□□□ -1.77
SSSCA1O60232 RNU1-77P-201ENST00000390868 162 ntBASIC4□□□□□ -1.77
SSSCA1O60232 RNA5SP339-201ENST00000390987 122 ntBASIC4□□□□□ -1.77
SSSCA1O60232 U3.35-201ENST00000408405 208 ntBASIC4□□□□□ -1.77
SSSCA1O60232 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 OR13Z1P-201ENST00000416141 834 ntBASIC4□□□□□ -1.77
SSSCA1O60232 AL133325.1-201ENST00000421090 382 ntBASIC4□□□□□ -1.77
SSSCA1O60232 RPS4XP16-201ENST00000427198 791 ntBASIC4□□□□□ -1.77
SSSCA1O60232 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 BX323845.1-201ENST00000432417 179 ntBASIC4□□□□□ -1.77
SSSCA1O60232 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 AC002504.1-201ENST00000438281 691 ntBASIC4□□□□□ -1.77
SSSCA1O60232 AL390119.1-201ENST00000440329 312 ntBASIC4□□□□□ -1.77
SSSCA1O60232 RPS29P9-201ENST00000440360 171 ntBASIC4□□□□□ -1.77
SSSCA1O60232 Z92846.1-201ENST00000456203 268 ntBASIC4□□□□□ -1.77
SSSCA1O60232 CTSLP6-201ENST00000458273 1002 ntBASIC4□□□□□ -1.77
SSSCA1O60232 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 AL133445.1-201ENST00000467051 452 ntBASIC4□□□□□ -1.77
SSSCA1O60232 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 RN7SL612P-201ENST00000497704 295 ntBASIC4□□□□□ -1.77
SSSCA1O60232 ARL4AP1-201ENST00000503220 705 ntBASIC4□□□□□ -1.77
SSSCA1O60232 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4□□□□□ -1.77
SSSCA1O60232 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4□□□□□ -1.77
SSSCA1O60232 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4□□□□□ -1.77
SSSCA1O60232 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4□□□□□ -1.77
SSSCA1O60232 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4□□□□□ -1.77
SSSCA1O60232 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 uc_338.18-201ENST00000615451 175 ntBASIC4□□□□□ -1.77
SSSCA1O60232 AC015804.1-201ENST00000622935 435 ntBASIC4□□□□□ -1.77
SSSCA1O60232 OR13C1P-202ENST00000641378 2919 ntBASIC4□□□□□ -1.77
SSSCA1O60232 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4□□□□□ -1.77
SSSCA1O60232 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4□□□□□ -1.77
SSSCA1O60232 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSSCA1O60232 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SSSCA1O60232 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SSSCA1O60232 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 IL6STP1-201ENST00000346911 1020 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 RNU4-44P-201ENST00000363050 141 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 RN7SKP275-201ENST00000364626 301 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 MIR1182-201ENST00000408363 97 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.99□□□□□ -1.77
SSSCA1O60232 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.99□□□□□ -1.77
SSSCA1O60232 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.99□□□□□ -1.77
SSSCA1O60232 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.99□□□□□ -1.77
SSSCA1O60232 CYCSP6-201ENST00000434498 302 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.99□□□□□ -1.77
SSSCA1O60232 SUMO2P3-201ENST00000438311 288 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC004938.1-201ENST00000438468 308 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 ARL4AP3-201ENST00000441452 574 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.99□□□□□ -1.77
SSSCA1O60232 RN7SL517P-201ENST00000462240 305 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.99□□□□□ -1.77
SSSCA1O60232 RPL23AP37-201ENST00000479658 549 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.99□□□□□ -1.77
SSSCA1O60232 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC010350.1-201ENST00000504908 231 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC021146.3-201ENST00000511911 260 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.99□□□□□ -1.77
SSSCA1O60232 AC090022.1-201ENST00000546569 311 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 GSTP1P1-201ENST00000548078 319 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC079075.1-201ENST00000559543 878 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC010547.6-201ENST00000571789 193 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 MIR1273E-201ENST00000581165 102 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 MIR4505-201ENST00000582238 73 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AL353600.1-201ENST00000608148 251 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AL451049.1-201ENST00000608672 497 ntBASIC3.99□□□□□ -1.77
SSSCA1O60232 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.99□□□□□ -1.77
SSSCA1O60232 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.99□□□□□ -1.77
SSSCA1O60232 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC3.99□□□□□ -1.77
SSSCA1O60232 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.99□□□□□ -1.77
SSSCA1O60232 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSSCA1O60232 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms