Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PROM1O43490 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.69□□□□□ -1.5
PROM1O43490 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.69□□□□□ -1.5
PROM1O43490 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PROM1O43490 SAMM50P1-201ENST00000455403 1399 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AL354854.1-201ENST00000455940 1363 ntBASIC5.68□□□□□ -1.5
PROM1O43490 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 AL359715.4-201ENST00000606629 1436 ntBASIC5.68□□□□□ -1.5
PROM1O43490 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PROM1O43490 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PROM1O43490 Y_RNA.169-201ENST00000363745 96 ntBASIC5.68□□□□□ -1.5
PROM1O43490 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 RNU6-1005P-201ENST00000384519 107 ntBASIC5.68□□□□□ -1.5
PROM1O43490 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PROM1O43490 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PROM1O43490 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.68□□□□□ -1.5
PROM1O43490 MORF4L1P6-201ENST00000418771 268 ntBASIC5.68□□□□□ -1.5
PROM1O43490 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 AC092651.1-201ENST00000426110 312 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AL590399.2-201ENST00000427536 309 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.68□□□□□ -1.5
PROM1O43490 AL365220.1-201ENST00000432923 399 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 AC009963.3-201ENST00000458090 486 ntBASIC5.68□□□□□ -1.5
PROM1O43490 ACA64.4-201ENST00000459070 127 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AC084754.1-201ENST00000463466 464 ntBASIC5.68□□□□□ -1.5
PROM1O43490 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 AC093719.1-201ENST00000480427 441 ntBASIC5.68□□□□□ -1.5
PROM1O43490 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.68□□□□□ -1.5
PROM1O43490 AC026782.2-201ENST00000510845 636 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AC133963.2-201ENST00000513686 578 ntBASIC5.68□□□□□ -1.5
PROM1O43490 PRMT5P1-201ENST00000514351 598 ntBASIC5.68□□□□□ -1.5
PROM1O43490 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.68□□□□□ -1.5
PROM1O43490 IGKV3D-25-201ENST00000519599 235 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.68□□□□□ -1.5
PROM1O43490 LRRC6P1-201ENST00000532188 885 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.68□□□□□ -1.5
PROM1O43490 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.68□□□□□ -1.5
PROM1O43490 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 AL049779.3-201ENST00000557141 606 ntBASIC5.68□□□□□ -1.5
PROM1O43490 MIR3614-201ENST00000581261 86 ntBASIC5.68□□□□□ -1.5
PROM1O43490 CBX3P2-202ENST00000583365 535 ntBASIC5.68□□□□□ -1.5
PROM1O43490 PIGPP4-201ENST00000584447 307 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.68□□□□□ -1.5
PROM1O43490 AP001437.1-201ENST00000608783 456 ntBASIC5.68□□□□□ -1.5
PROM1O43490 AC090116.1-201ENST00000615679 446 ntBASIC5.68□□□□□ -1.5
PROM1O43490 RMST_5.1-201ENST00000618704 126 ntBASIC5.68□□□□□ -1.5
PROM1O43490 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PROM1O43490 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 AC099654.6-201ENST00000636487 512 ntBASIC5.68□□□□□ -1.5
PROM1O43490 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PROM1O43490 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 AC022164.1-201ENST00000568767 2673 ntBASIC5.68□□□□□ -1.5
PROM1O43490 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 AC008627.1-201ENST00000517511 1704 ntBASIC5.68□□□□□ -1.5
PROM1O43490 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.68□□□□□ -1.5
PROM1O43490 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PROM1O43490 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PROM1O43490 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.67□□□□□ -1.5
PROM1O43490 UGT2B24P-201ENST00000514441 1597 ntBASIC5.67□□□□□ -1.5
PROM1O43490 GNL2P1-201ENST00000451274 2190 ntBASIC5.67□□□□□ -1.5
PROM1O43490 THAP12P9-201ENST00000503971 2360 ntBASIC5.67□□□□□ -1.5
PROM1O43490 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PROM1O43490 CASC19-260ENST00000641828 2001 ntBASIC5.67□□□□□ -1.5
PROM1O43490 RBPJP7-201ENST00000442803 1447 ntBASIC5.67□□□□□ -1.5
PROM1O43490 RBPJP5-201ENST00000449433 1447 ntBASIC5.67□□□□□ -1.5
PROM1O43490 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.67□□□□□ -1.5
PROM1O43490 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms