Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RNU1-149P-201ENST00000390870 161 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 OR8V1P-201ENST00000395193 873 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 OR4K12P-201ENST00000406538 961 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RN7SKP59-201ENST00000410520 314 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 CFL1P1-202ENST00000432948 411 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC090018.1-201ENST00000434369 367 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC013410.1-201ENST00000436223 1232 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 PPIAP20-201ENST00000449839 135 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC011225.1-201ENST00000457751 369 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RPS21P4-201ENST00000487122 248 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RNA5SP373-201ENST00000517271 95 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AL353796.1-201ENST00000561542 3241 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RPL10P14-201ENST00000565265 298 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AP003072.5-201ENST00000623872 773 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 AC136428.4-201ENST00000634254 1155 ntBASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TRAPPC4Q9Y296 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 RNU1-146P-201ENST00000364015 165 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 MIR105-1-201ENST00000385222 81 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 RN7SKP125-201ENST00000410481 302 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 RPS26P41-201ENST00000450370 284 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AL445433.1-201ENST00000457507 257 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC091544.1-201ENST00000484702 348 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 RPS4XP20-201ENST00000505751 772 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 RNU6-941P-201ENST00000516346 108 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC090022.1-201ENST00000546569 311 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 MIR8069-1-201ENST00000616627 86 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 MIR8069-2-201ENST00000621412 86 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC126323.6-202ENST00000568092 3511 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC023421.1-201ENST00000590535 1785 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 AC007342.5-201ENST00000571340 2142 ntBASIC4.75□□□□□ -1.65
TRAPPC4Q9Y296 DDX18P6-201ENST00000450119 1997 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 AC133552.1-201ENST00000569988 4007 ntBASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAPPC4Q9Y296 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms