Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 TOMM22P4-201ENST00000511318 336 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC114781.3-201ENST00000512083 142 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC091163.3-201ENST00000518269 1144 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MTND2P32-201ENST00000521584 1038 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AP001372.4-201ENST00000524889 472 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL158211.1-201ENST00000566763 763 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 NDUFA5P11-201ENST00000567995 343 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MIR4776-2-201ENST00000580204 80 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 AL365181.4-201ENST00000609800 547 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 MIR6793-201ENST00000612376 63 ntBASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
NECTIN3Q9NQS3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 METTL21EP-201ENST00000298105 713 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL035419.1-201ENST00000397037 564 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC013404.1-201ENST00000413068 249 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 METTL15P3-201ENST00000415522 1221 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 BX284632.2-201ENST00000421091 399 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 FTH1P16-201ENST00000435241 552 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL445928.1-201ENST00000435545 222 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 VN1R110P-201ENST00000438988 971 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 MTCO1P53-201ENST00000441633 699 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL512605.1-202ENST00000441919 381 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 RPS7P3-201ENST00000443360 580 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL359955.2-201ENST00000445380 353 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 RPL31P44-201ENST00000447680 377 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 TRY2P-201ENST00000448860 689 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 RPS3AP53-201ENST00000454716 778 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC060775.1-201ENST00000518241 520 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 WBP1LP3-201ENST00000523033 208 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 EIF4A2P5-201ENST00000529914 499 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 OR11H3P-201ENST00000554547 982 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC125494.2-201ENST00000602431 657 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AL157392.4-201ENST00000609756 345 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC096586.1-201ENST00000610267 561 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 CYCSP41-201ENST00000616920 296 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC022400.9-201ENST00000623633 273 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC138907.10-201ENST00000623708 983 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC129778.1-202ENST00000623812 261 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 AC005618.4-201ENST00000625053 554 ntBASIC5.59□□□□□ -1.51
NECTIN3Q9NQS3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms