Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 TMEM14EP-201ENST00000408960 378 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 RN7SKP127-201ENST00000410443 354 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 RN7SKP240-201ENST00000410583 375 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 HMGN1P24-201ENST00000412282 298 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 RPL7AP14-201ENST00000424041 802 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC110602.1-201ENST00000437414 318 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 DDX3P2-201ENST00000446138 111 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 PGAM4-201ENST00000458128 765 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 RPS20P20-201ENST00000460498 340 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 RPL12P40-201ENST00000467028 488 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC084357.2-201ENST00000509615 275 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC123904.3-201ENST00000547218 814 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC055876.4-201ENST00000562515 712 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 MIR4512-201ENST00000583257 77 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC008734.2-201ENST00000595277 477 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AL031429.2-201ENST00000602605 649 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC130324.3-201ENST00000614165 542 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC004678.1-201ENST00000615016 929 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC073862.4-201ENST00000622982 854 ntBASIC9.42□□□□□ -0.9
RTN4Q9NQC3 LINC01206-231ENST00000629026 858 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RTN4Q9NQC3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 OR5J1P-201ENST00000313544 939 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 IL4-202ENST00000350025 414 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 RNA5SP141-201ENST00000364543 120 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 RNY4P16-201ENST00000364768 94 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL589763.1-201ENST00000412257 791 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL450304.1-201ENST00000418657 759 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 Z74696.1-201ENST00000428208 1123 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 EZH2P1-201ENST00000431167 291 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL359921.1-201ENST00000433131 494 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 BNIP3P2-201ENST00000441221 577 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 RPS20P24-201ENST00000457473 361 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL121721.1-201ENST00000460400 568 ntTSL 4 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 RPS4XP10-201ENST00000465034 731 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 RPS3P7-201ENST00000488662 726 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AK3P4-201ENST00000504283 583 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC010486.1-201ENST00000511793 424 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 SNORA40.12-201ENST00000516329 111 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 RNA5SP337-201ENST00000517007 109 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC244034.2-201ENST00000562504 509 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC034105.3-201ENST00000565294 442 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC098848.2-201ENST00000588023 330 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AL136363.1-201ENST00000605349 337 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 MIR6880-201ENST00000622851 62 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms