Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 AC011487.3-201ENST00000593607 453 ntBASIC5.51□□□□□ -1.53
NXF3Q9H4D5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 AC073575.2-201ENST00000614212 627 ntBASIC5.51□□□□□ -1.53
NXF3Q9H4D5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 OR4G1P-202ENST00000641173 1788 ntBASIC5.51□□□□□ -1.53
NXF3Q9H4D5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NXF3Q9H4D5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 SNORA2.3-201ENST00000383920 135 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AL390316.1-201ENST00000406279 553 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 SNORA77-201ENST00000408716 125 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 REREP1Y-201ENST00000422655 198 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 MRPS21P2-201ENST00000424704 264 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 RPS27AP6-201ENST00000427962 448 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 HSPD1P12-201ENST00000429127 1069 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AC006466.1-201ENST00000438721 289 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 REREP2Y-201ENST00000439103 200 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AL137845.2-201ENST00000444292 988 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AL354714.3-201ENST00000447284 493 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 RPL7P16-201ENST00000479738 738 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 MRPS33P2-201ENST00000507850 322 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 NMNAT1P1-201ENST00000554095 876 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AL136295.6-201ENST00000610486 658 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AC093671.1-201ENST00000624981 2929 ntBASIC5.5□□□□□ -1.53
NXF3Q9H4D5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NXF3Q9H4D5 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 MIR133A2-201ENST00000347538 102 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 U3.23-201ENST00000391132 200 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 AP002530.1-201ENST00000405705 684 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 MGAT2P2-201ENST00000427194 797 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 AL049745.1-201ENST00000433953 286 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 OR7E125P-201ENST00000443450 846 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 AL161722.1-201ENST00000446972 1032 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 GCSHP4-201ENST00000538792 439 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 PCNPP1-201ENST00000552501 511 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 AC009117.1-201ENST00000563948 554 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 EIF1P5-201ENST00000585002 234 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 AC005084.1-201ENST00000605160 304 ntBASIC5.49□□□□□ -1.53
NXF3Q9H4D5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NXF3Q9H4D5 SCARNA15-201ENST00000607520 4325 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms