Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 U8.4-201ENST00000363626 134 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 RMRPP5-201ENST00000411156 267 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC019205.1-201ENST00000421830 730 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 GTF3AP5-201ENST00000442645 697 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 CEACAMP9-201ENST00000442990 513 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 CEACAMP7-201ENST00000444105 496 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 RPS6P2-201ENST00000454208 705 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC022215.1-201ENST00000481770 362 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC099521.1-201ENST00000482557 334 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC009120.1-201ENST00000493458 473 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC098976.1-201ENST00000513014 541 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 HMGB1P42-201ENST00000532126 553 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 MIR7853-201ENST00000584820 132 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC009237.13-201ENST00000603193 276 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM4Q9C037 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 AC005332.5-201ENST00000591222 2919 ntBASIC5.37□□□□□ -1.55
TRIM4Q9C037 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM4Q9C037 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 AC126323.6-202ENST00000568092 3511 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 AC007618.1-201ENST00000366455 732 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 RPL21P67-201ENST00000402896 478 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 NENFP1-201ENST00000419476 466 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 PSMD10P3-201ENST00000437000 448 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 PA2G4P6-201ENST00000438325 1197 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 TPT1P13-201ENST00000449760 499 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 RN7SL222P-201ENST00000476452 299 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 AC090638.1-201ENST00000498296 909 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 PRELID3BP5-201ENST00000508612 460 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 BTG4P1-201ENST00000510421 183 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 AC079075.1-201ENST00000559543 878 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 MIR4330-201ENST00000579077 105 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 MIR4646-201ENST00000580775 63 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 RN7SL435P-201ENST00000584418 282 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 AC114786.1-201ENST00000512892 1415 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 AL022393.1-201ENST00000625142 1677 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM4Q9C037 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 SRRM1P3-201ENST00000426911 2678 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 AL672167.1-204ENST00000641875 3017 ntBASIC5.36□□□□□ -1.55
TRIM4Q9C037 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM4Q9C037 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM4Q9C037 CASC19-204ENST00000641001 2055 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 TRIM51GP-201ENST00000534741 1350 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 MIR765-201ENST00000390226 114 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 RNA5SP241-201ENST00000391326 114 ntBASIC5.35□□□□□ -1.55
TRIM4Q9C037 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM4Q9C037 AC091390.1-201ENST00000433904 331 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms