Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 NPM1P6-201ENST00000521088 871 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC078899.1-201ENST00000521432 1185 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC090424.1-201ENST00000535243 736 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 FAM72A-208ENST00000607379 1139 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 AL162574.1-201ENST00000615702 950 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC009032.1-201ENST00000617574 431 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC127024.6-201ENST00000621598 424 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 AC026124.2-201ENST00000621847 656 ntBASIC5.41□□□□□ -1.54
VMP1Q96GC9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VMP1Q96GC9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VMP1Q96GC9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VMP1Q96GC9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.41□□□□□ -1.54
VMP1Q96GC9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VMP1Q96GC9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VMP1Q96GC9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VMP1Q96GC9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VMP1Q96GC9 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VMP1Q96GC9 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VMP1Q96GC9 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 RN7SKP292-201ENST00000365522 317 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC083799.1-201ENST00000366451 910 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VMP1Q96GC9 RNA5SP122-201ENST00000384457 108 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 RPL11P3-201ENST00000395256 523 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 DPY19L1P2-201ENST00000426647 915 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL158073.1-201ENST00000426848 1104 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL022331.1-201ENST00000429025 477 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC096775.1-201ENST00000437724 448 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 APOOP2-201ENST00000461561 539 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 UBFD1P1-201ENST00000473259 814 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 RPS17P15-201ENST00000475609 349 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VMP1Q96GC9 PPIAP19-201ENST00000486414 492 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 RPL7P51-201ENST00000490532 749 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC015864.1-201ENST00000496512 544 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 PGBD4P4-201ENST00000509673 613 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 RNU6-889P-201ENST00000517189 103 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 CYCSP22-201ENST00000517555 339 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC008083.2-201ENST00000546707 476 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 NPM1P47-201ENST00000560843 856 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC090312.1-201ENST00000580637 348 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 MIR3614-201ENST00000581261 86 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC015802.2-201ENST00000589690 189 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL133247.2-201ENST00000603236 482 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL049844.2-201ENST00000604280 628 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL133406.3-201ENST00000606817 541 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AL133481.2-203ENST00000607558 139 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 RN7SL544P-201ENST00000617232 284 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 uc_338.9-201ENST00000617424 182 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 RN7SL763P-201ENST00000620922 284 ntBASIC5.4□□□□□ -1.54
VMP1Q96GC9 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.4□□□□□ -1.54
VMP1Q96GC9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VMP1Q96GC9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VMP1Q96GC9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.4□□□□□ -1.55
VMP1Q96GC9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VMP1Q96GC9 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.4□□□□□ -1.55
VMP1Q96GC9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
VMP1Q96GC9 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.4□□□□□ -1.55
VMP1Q96GC9 OR13C1P-202ENST00000641378 2919 ntBASIC5.4□□□□□ -1.55
VMP1Q96GC9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VMP1Q96GC9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.4□□□□□ -1.55
VMP1Q96GC9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.4□□□□□ -1.55
VMP1Q96GC9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.39□□□□□ -1.55
VMP1Q96GC9 MAPK10-349ENST00000641767 3661 ntBASIC5.39□□□□□ -1.55
VMP1Q96GC9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
VMP1Q96GC9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VMP1Q96GC9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
VMP1Q96GC9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VMP1Q96GC9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms