Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 MIR6778-201ENST00000617912 73 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 MIR8080-201ENST00000622224 89 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AP002967.1-201ENST00000624203 539 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC011755.1-201ENST00000623763 2049 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC104623.2-202ENST00000623477 4002 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC005294.1-201ENST00000355509 281 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 SDHDP6-201ENST00000414693 480 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 PCNPP4-201ENST00000414817 517 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 MARK2P12-201ENST00000420129 585 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 RPS29P14-201ENST00000431518 171 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 RN7SL547P-201ENST00000490793 290 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 RNU6-941P-201ENST00000516346 108 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 SUGT1P3-202ENST00000604259 383 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 BNIP3P35-201ENST00000604530 490 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 RNA5SP440-201ENST00000612665 119 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC127024.6-201ENST00000621598 424 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AL691477.1-201ENST00000624398 162 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 CYP4F35P-202ENST00000636121 390 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 HSPA8P17-201ENST00000427029 1382 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC107027.3-201ENST00000565095 3473 ntBASIC4.98□□□□□ -1.61
CLHC1Q8NHS4 AC006210.2-201ENST00000367074 1545 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 RNU1-149P-201ENST00000390870 161 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AL031985.1-201ENST00000392713 418 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 SEPT7P8-201ENST00000413308 775 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 NAP1L4P2-201ENST00000425958 899 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 RPL7P40-201ENST00000481703 745 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 EIF1P7-201ENST00000487533 337 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 ENPP7P11-201ENST00000505915 627 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AC006427.1-201ENST00000514359 712 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AC022404.1-201ENST00000555320 273 ntBASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLHC1Q8NHS4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms