Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 KARSP1-201ENST00000451871 1752 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 RNU6-413P-201ENST00000384115 107 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC112492.2-201ENST00000432774 1030 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 RPS20P4-201ENST00000461659 355 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC107015.1-201ENST00000466902 747 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC005017.1-201ENST00000482002 490 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 RPL29P23-201ENST00000486188 442 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC025459.1-201ENST00000504072 156 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC092349.1-201ENST00000504903 310 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC122718.2-201ENST00000505325 591 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC113367.2-201ENST00000505749 160 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 SETP21-201ENST00000514799 892 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC013701.1-201ENST00000522657 465 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC121758.1-202ENST00000556917 658 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC095055.1-201ENST00000603472 1113 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC006924.1-201ENST00000610750 559 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AL158062.1-201ENST00000619632 745 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AL359715.5-201ENST00000623431 443 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AL392088.2-201ENST00000637607 285 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC015799.1-201ENST00000622996 3122 ntBASIC5.48□□□□□ -1.53
CPEB3Q8NE35 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
CPEB3Q8NE35 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 ECM1P2-201ENST00000503354 1577 ntBASIC5.47□□□□□ -1.53
CPEB3Q8NE35 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.47□□□□□ -1.53
CPEB3Q8NE35 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 SNORD8-201ENST00000363915 110 ntBASIC5.47□□□□□ -1.53
CPEB3Q8NE35 RNU6-553P-201ENST00000364047 96 ntBASIC5.47□□□□□ -1.53
CPEB3Q8NE35 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 MIR433-201ENST00000384837 93 ntBASIC5.47□□□□□ -1.53
CPEB3Q8NE35 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.47□□□□□ -1.53
CPEB3Q8NE35 AC022028.1-201ENST00000412054 408 ntBASIC5.47□□□□□ -1.53
CPEB3Q8NE35 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms