Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SMC1BQ8NDV3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC007382.1-201ENST00000624376 2618 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 HSPA8P14-201ENST00000552265 1805 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 UBE2V1P9-201ENST00000414760 368 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 SSR1P2-201ENST00000415208 787 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC099677.3-201ENST00000427081 395 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 BX119904.1-201ENST00000432026 348 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 MGAT2P1-201ENST00000449718 797 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 CYCSP20-201ENST00000473154 315 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 RN7SL447P-201ENST00000494711 245 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 RN7SKP248-201ENST00000516278 305 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC134698.5-201ENST00000519444 336 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 OR4A40P-201ENST00000533878 948 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC021483.2-201ENST00000567415 758 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 TXNP4-201ENST00000575018 310 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC087783.2-201ENST00000605070 562 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AL352984.2-202ENST00000613699 155 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 DNM1P47-203ENST00000571780 12667 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 AC011815.2-201ENST00000618230 2021 ntBASIC6.88□□□□□ -1.31
SMC1BQ8NDV3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 OR2M1P-201ENST00000318104 951 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 RNU4-4P-201ENST00000364588 130 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC115285.1-201ENST00000424879 736 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC016712.1-201ENST00000431088 378 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AL138878.2-201ENST00000440581 1241 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 MTND1P33-201ENST00000446251 917 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 RSU1P1-201ENST00000453416 441 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 RN7SL459P-201ENST00000481078 302 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC116562.1-201ENST00000485355 781 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 IGBP1P5-201ENST00000507524 1000 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 SLC25A15P5-201ENST00000508033 253 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 OR8G5-201ENST00000524943 1041 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 OR5AZ1P-201ENST00000527448 943 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 ATP5J2P6-201ENST00000565203 266 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 CBX3P2-202ENST00000583365 535 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC119403.2-201ENST00000590960 598 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC008745.1-201ENST00000604064 271 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC073137.1-201ENST00000605636 634 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC018690.1-201ENST00000608144 626 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC006927.2-201ENST00000639256 389 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 OLMALINC-203ENST00000641087 3779 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AC009120.2-204ENST00000621548 2032 ntBASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMC1BQ8NDV3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms