Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC006042.3-201ENST00000454684 1469 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC019155.1-201ENST00000382242 574 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 MTATP6P11-201ENST00000428071 670 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC073508.1-201ENST00000428866 656 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC068228.1-201ENST00000461723 211 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 RN7SL193P-201ENST00000491708 276 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC122718.2-201ENST00000505325 591 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 RN7SKP238-201ENST00000516483 249 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 OR8Q1P-201ENST00000526467 655 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC084824.2-201ENST00000548906 345 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC068446.3-201ENST00000555285 382 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC002310.3-201ENST00000569728 723 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC090312.1-201ENST00000580637 348 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 MIR3936-201ENST00000584304 110 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC015712.7-201ENST00000615211 635 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AL035661.1-201ENST00000620459 1144 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 CR392039.4-201ENST00000624968 501 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 FRG1DP-201ENST00000635586 771 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 OR2L1P-202ENST00000641567 1023 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 CYP1D1P-201ENST00000416662 1433 ntBASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LSMEM1Q8N8F7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RNF6P1-201ENST00000444889 1784 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RPL31P52-201ENST00000407532 367 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RN7SKP29-201ENST00000410957 272 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RNF10P1-201ENST00000418589 369 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AL121882.1-201ENST00000422893 417 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 FTH1P16-201ENST00000435241 552 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 CLNS1AP1-201ENST00000435954 682 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AC069540.1-201ENST00000446320 988 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 OR7E116P-201ENST00000448529 957 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 MTND2P8-201ENST00000450555 1025 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 MEMO1P4-201ENST00000453590 386 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AC118758.1-202ENST00000454719 225 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 TPT1P1-201ENST00000458495 518 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AC010683.1-201ENST00000473673 378 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RPS17P15-201ENST00000475609 349 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 MTND3P24-201ENST00000506306 329 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 MTND2P31-201ENST00000512602 616 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RN7SKP183-201ENST00000517169 324 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 PCNAP4-201ENST00000532690 730 ntBASIC5.27□□□□□ -1.57
LSMEM1Q8N8F7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms