Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 PMS2P3-207ENST00000529061 717 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 OR5AM1P-201ENST00000532136 1032 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AC024405.1-201ENST00000532521 1042 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AC127381.1-201ENST00000555979 939 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AC233266.2-201ENST00000567067 528 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AP005262.1-201ENST00000582646 997 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AC015802.2-201ENST00000589690 189 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AP001033.2-201ENST00000609701 1003 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AC025016.1-201ENST00000616746 682 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AP000484.1-201ENST00000620067 1252 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AL356863.1-201ENST00000623378 1080 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.16□□□□□ -1.58
CLIP4Q8N3C7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 AP005432.1-201ENST00000580891 3485 ntBASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.15□□□□□ -1.58
CLIP4Q8N3C7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 RN7SKP187-201ENST00000365536 330 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 OR7E156P-201ENST00000400303 464 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AL356968.2-201ENST00000412769 1257 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 RPSAP35-201ENST00000413753 818 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC127526.2-201ENST00000426436 775 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC115283.1-201ENST00000427353 400 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 CDY8P-201ENST00000428380 1279 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 CDY20P-201ENST00000447528 1279 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AZGP1P2-201ENST00000454506 345 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 MTND2P6-201ENST00000455337 1030 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 TPT1P1-201ENST00000458495 518 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC022336.1-201ENST00000475510 337 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 PRELID3BP6-201ENST00000503839 571 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 FABP5P6-201ENST00000510588 409 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 MTCO3P27-201ENST00000514397 196 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC060775.1-201ENST00000518241 520 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AP003355.1-201ENST00000518956 587 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 MRPS16P1-201ENST00000523462 412 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 OR4A17P-201ENST00000526032 904 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 TRIM51DP-201ENST00000529746 596 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 HMGB1P42-201ENST00000532126 553 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 MTATP6P24-201ENST00000576835 677 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC006272.2-201ENST00000594725 163 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 RN7SL544P-201ENST00000617232 284 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AL645927.2-201ENST00000618350 349 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 RN7SL763P-201ENST00000620922 284 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC025262.3-201ENST00000623666 360 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 AC025574.1-201ENST00000554784 1653 ntBASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.15□□□□□ -1.59
CLIP4Q8N3C7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms