Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 SNORA5.1-201ENST00000384275 131 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 SNORA35-201ENST00000386104 128 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AL450992.3-201ENST00000413192 568 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 MRPS21P5-201ENST00000417885 231 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AL360013.1-201ENST00000419031 858 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RPL7P44-201ENST00000424827 742 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 CYP4F34P-201ENST00000425951 481 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AL589823.1-201ENST00000429577 183 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 MTND2P40-201ENST00000436718 841 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC092809.1-201ENST00000441469 474 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC008620.1-201ENST00000468453 592 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RPS6P4-201ENST00000494693 758 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 ARL4AP1-201ENST00000503220 705 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 HMGB1P23-201ENST00000518743 568 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RPL12P22-201ENST00000519073 490 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC007115.1-201ENST00000546853 234 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 GTF2IP8-201ENST00000560687 584 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 MIR4786-201ENST00000583954 80 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC090241.1-201ENST00000587732 621 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC006116.6-201ENST00000593258 1103 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC080078.2-201ENST00000603766 501 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AC243830.3-201ENST00000616810 376 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 AP001264.1-201ENST00000620602 703 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 MRPL57P1-201ENST00000621486 265 ntBASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD2Q8IV50 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.59□□□□□ -1.52
LYSMD2Q8IV50 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
LYSMD2Q8IV50 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
LYSMD2Q8IV50 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
LYSMD2Q8IV50 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LYSMD2Q8IV50 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 MAPK10-338ENST00000641647 3362 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 DLEU2L-201ENST00000371086 3555 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 RPS3AP5-201ENST00000389400 821 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 MTCO3P41-201ENST00000414801 328 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 AC007365.2-201ENST00000428806 458 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 MED14P1-201ENST00000430517 648 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 AL050321.1-201ENST00000432363 400 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 RPS3AP38-201ENST00000435889 763 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 RPL23AP28-201ENST00000448062 470 ntBASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD2Q8IV50 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms