Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 PABPC1P9-201ENST00000426076 1612 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 Y_RNA.18-201ENST00000362461 102 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 RNY4P14-201ENST00000363656 96 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 RNU6-1090P-201ENST00000364065 94 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 Y_RNA.394-201ENST00000383942 103 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 RNU1-56P-201ENST00000391303 164 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC007068.1-201ENST00000396690 844 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 DNAJC19P6-201ENST00000401853 280 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC069154.1-201ENST00000432914 542 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC096632.2-201ENST00000438139 1239 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC083855.1-201ENST00000440041 258 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 PMS2P9-201ENST00000441237 515 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 HMGN1P32-201ENST00000441744 256 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 PPIAP32-201ENST00000449940 472 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 PSPHP1-201ENST00000450062 261 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 IGBP1P4-201ENST00000503202 879 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC069240.2-201ENST00000550242 609 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 WDR45BP1-201ENST00000583470 1029 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC010928.3-201ENST00000587712 541 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC060780.3-201ENST00000589464 80 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC012065.4-201ENST00000602445 679 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AL050343.2-201ENST00000607338 280 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SNORA16A-202ENST00000628458 135 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 RACGAP1P-201ENST00000550663 1879 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 AC110597.1-201ENST00000562669 3176 ntBASIC6.18□□□□□ -1.42
ATG4DQ86TL0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ATG4DQ86TL0 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms