Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL449283.1-201ENST00000602631 3403 ntBASIC7.28□□□□□ -1.24
LYSMD3Q7Z3D4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LYSMD3Q7Z3D4 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
LYSMD3Q7Z3D4 AP001157.1-201ENST00000550837 2339 ntBASIC7.28□□□□□ -1.24
LYSMD3Q7Z3D4 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LYSMD3Q7Z3D4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
LYSMD3Q7Z3D4 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.24
LYSMD3Q7Z3D4 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 RN7SKP59-201ENST00000410520 314 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 NUP35P1-201ENST00000422734 947 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 SDCBPP2-201ENST00000424643 885 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 PGBD4P3-201ENST00000440731 581 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL161626.1-201ENST00000441480 490 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 GAPDHP17-201ENST00000449858 1001 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL928654.1-201ENST00000476081 354 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC114981.1-201ENST00000503897 678 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 KCTD9P5-201ENST00000504141 1170 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC008967.1-201ENST00000504843 163 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC010493.1-201ENST00000513479 292 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 RN7SKP13-201ENST00000515933 244 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 IGLV1-62-201ENST00000518003 441 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC083923.1-201ENST00000523708 376 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC243972.3-201ENST00000539655 198 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ANP32BP1-202ENST00000568553 737 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC024614.1-201ENST00000577546 307 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 MIR3171-201ENST00000584270 74 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC136443.5-201ENST00000603741 370 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AC134503.1-201ENST00000633048 54 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ZNF733P-202ENST00000444809 1573 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 NSRP1P1-201ENST00000444067 1693 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ENO1P4-201ENST00000416471 1785 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 MAPK10-365ENST00000641902 3825 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 BRD7P1-201ENST00000557705 1915 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 CYP1D1P-201ENST00000416662 1433 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 AL031651.1-201ENST00000615357 1438 ntBASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.27□□□□□ -1.25
LYSMD3Q7Z3D4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 Y_RNA.97-201ENST00000363094 102 ntBASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 Y_RNA.145-201ENST00000363527 102 ntBASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 RNU6-1103P-201ENST00000384150 107 ntBASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 EI24P3-201ENST00000399046 1062 ntBASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 AL122016.1-201ENST00000403365 367 ntBASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.26□□□□□ -1.25
LYSMD3Q7Z3D4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms