Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AC091959.2-201ENST00000477363 321 ntBASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AC007016.1-201ENST00000512110 244 ntBASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AC009237.13-201ENST00000603193 276 ntBASIC4.96□□□□□ -1.62
RIF1Q5UIP0 AP003400.3-201ENST00000624904 346 ntBASIC4.96□□□□□ -1.62
RIF1Q5UIP0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
RIF1Q5UIP0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RIF1Q5UIP0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 AC032011.1-201ENST00000611703 1549 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 RNU1-136P-201ENST00000384181 164 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 RPL21P108-201ENST00000413857 481 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 OSTCP1-201ENST00000455507 450 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 AC079080.1-201ENST00000479841 822 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 ENPP7P9-201ENST00000514456 627 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 MTCO1P49-201ENST00000523429 802 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 AC005005.4-201ENST00000623789 16698 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 NCLP2-201ENST00000416078 1462 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 Z97832.1-201ENST00000402490 328 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 RN7SKP114-201ENST00000410327 279 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 AL132765.1-201ENST00000434165 553 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 PRPF38AP1-201ENST00000451976 933 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 TOMM22P4-201ENST00000511318 336 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.95□□□□□ -1.62
RIF1Q5UIP0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.95□□□□□ -1.62
RIF1Q5UIP0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 RNU1-24P-201ENST00000364285 165 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 SNORD56.6-201ENST00000384569 71 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 RPL34P6-201ENST00000432390 345 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AL591034.3-201ENST00000605511 685 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 MAPK10-270ENST00000641102 3538 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AL353763.1-201ENST00000624467 1628 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 CYCSP19-201ENST00000411715 316 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 KPNA2P3-201ENST00000584190 848 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 MIR3138-201ENST00000585238 82 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AP003400.2-201ENST00000624036 666 ntBASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.94□□□□□ -1.62
RIF1Q5UIP0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 AL138820.1-201ENST00000617901 5305 ntBASIC4.93□□□□□ -1.62
RIF1Q5UIP0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 UGT2B27P-201ENST00000505092 1620 ntBASIC4.93□□□□□ -1.62
RIF1Q5UIP0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 BX322650.1-201ENST00000332359 2143 ntBASIC4.93□□□□□ -1.62
RIF1Q5UIP0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 AC109464.1-201ENST00000511091 819 ntBASIC4.93□□□□□ -1.62
RIF1Q5UIP0 DHFRP1-201ENST00000579682 559 ntBASIC4.93□□□□□ -1.62
RIF1Q5UIP0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 AC244100.1-202ENST00000621554 382 ntBASIC4.93□□□□□ -1.62
RIF1Q5UIP0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RIF1Q5UIP0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms